Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trex1Q91XB0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trex1Q91XB0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Trex1Q91XB0 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.63■□□□□ 0.57
Trex1Q91XB0 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trex1Q91XB0 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trex1Q91XB0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trex1Q91XB0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trex1Q91XB0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trex1Q91XB0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Trex1Q91XB0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.63■□□□□ 0.57
Trex1Q91XB0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trex1Q91XB0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trex1Q91XB0 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.62■□□□□ 0.57
Trex1Q91XB0 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trex1Q91XB0 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trex1Q91XB0 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trex1Q91XB0 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.62■□□□□ 0.57
Trex1Q91XB0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Trex1Q91XB0 Mir6404-201ENSMUST00000183699 94 ntBASIC18.62■□□□□ 0.57
Trex1Q91XB0 Gm8000-201ENSMUST00000188378 592 ntBASIC18.62■□□□□ 0.57
Trex1Q91XB0 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.62■□□□□ 0.57
Trex1Q91XB0 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trex1Q91XB0 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trex1Q91XB0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trex1Q91XB0 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trex1Q91XB0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trex1Q91XB0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trex1Q91XB0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trex1Q91XB0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trex1Q91XB0 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.61■□□□□ 0.57
Trex1Q91XB0 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trex1Q91XB0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Trex1Q91XB0 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trex1Q91XB0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trex1Q91XB0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.61■□□□□ 0.57
Trex1Q91XB0 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.61■□□□□ 0.57
Trex1Q91XB0 AV026068-213ENSMUST00000223675 1171 ntBASIC18.61■□□□□ 0.57
Trex1Q91XB0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.61■□□□□ 0.57
Trex1Q91XB0 Psmb5-202ENSMUST00000227257 622 ntBASIC18.61■□□□□ 0.57
Trex1Q91XB0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trex1Q91XB0 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trex1Q91XB0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trex1Q91XB0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trex1Q91XB0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trex1Q91XB0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trex1Q91XB0 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trex1Q91XB0 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trex1Q91XB0 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.61■□□□□ 0.57
Trex1Q91XB0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trex1Q91XB0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trex1Q91XB0 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trex1Q91XB0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trex1Q91XB0 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trex1Q91XB0 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Trex1Q91XB0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Trex1Q91XB0 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trex1Q91XB0 Gm11779-201ENSMUST00000118541 368 ntBASIC18.6■□□□□ 0.57
Trex1Q91XB0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.6■□□□□ 0.57
Trex1Q91XB0 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.6■□□□□ 0.57
Trex1Q91XB0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trex1Q91XB0 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trex1Q91XB0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trex1Q91XB0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trex1Q91XB0 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trex1Q91XB0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trex1Q91XB0 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Trex1Q91XB0 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trex1Q91XB0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trex1Q91XB0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trex1Q91XB0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trex1Q91XB0 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.59■□□□□ 0.57
Trex1Q91XB0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trex1Q91XB0 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trex1Q91XB0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trex1Q91XB0 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Trex1Q91XB0 Gm11594-201ENSMUST00000122313 162 ntBASIC18.59■□□□□ 0.57
Trex1Q91XB0 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trex1Q91XB0 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trex1Q91XB0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trex1Q91XB0 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trex1Q91XB0 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trex1Q91XB0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.59■□□□□ 0.57
Trex1Q91XB0 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trex1Q91XB0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Trex1Q91XB0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.59■□□□□ 0.57
Trex1Q91XB0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Trex1Q91XB0 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trex1Q91XB0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trex1Q91XB0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trex1Q91XB0 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trex1Q91XB0 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trex1Q91XB0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trex1Q91XB0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trex1Q91XB0 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.58■□□□□ 0.57
Trex1Q91XB0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trex1Q91XB0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trex1Q91XB0 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trex1Q91XB0 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trex1Q91XB0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms