Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm25745-201ENSMUST00000174945 133 ntBASIC16.1■□□□□ 0.17
Vsx1Q91V10 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.1■□□□□ 0.17
Vsx1Q91V10 Gm4535-201ENSMUST00000182274 558 ntBASIC16.1■□□□□ 0.17
Vsx1Q91V10 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.1■□□□□ 0.17
Vsx1Q91V10 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vsx1Q91V10 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.1■□□□□ 0.17
Vsx1Q91V10 Gm10355-201ENSMUST00000097146 517 ntBASIC16.1■□□□□ 0.17
Vsx1Q91V10 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Vsx1Q91V10 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vsx1Q91V10 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Vsx1Q91V10 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vsx1Q91V10 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vsx1Q91V10 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vsx1Q91V10 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vsx1Q91V10 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Vsx1Q91V10 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vsx1Q91V10 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.09■□□□□ 0.17
Vsx1Q91V10 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Vsx1Q91V10 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vsx1Q91V10 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.09■□□□□ 0.17
Vsx1Q91V10 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vsx1Q91V10 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vsx1Q91V10 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.09■□□□□ 0.17
Vsx1Q91V10 Gm6089-201ENSMUST00000197666 938 ntBASIC16.09■□□□□ 0.17
Vsx1Q91V10 Gm7506-201ENSMUST00000207758 815 ntBASIC16.09■□□□□ 0.17
Vsx1Q91V10 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.09■□□□□ 0.17
Vsx1Q91V10 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Vsx1Q91V10 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vsx1Q91V10 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.09■□□□□ 0.17
Vsx1Q91V10 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vsx1Q91V10 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.09■□□□□ 0.17
Vsx1Q91V10 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vsx1Q91V10 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vsx1Q91V10 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vsx1Q91V10 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Vsx1Q91V10 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Vsx1Q91V10 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Vsx1Q91V10 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Vsx1Q91V10 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Vsx1Q91V10 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vsx1Q91V10 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.08■□□□□ 0.16
Vsx1Q91V10 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vsx1Q91V10 Gm25911-201ENSMUST00000157621 56 ntBASIC16.08■□□□□ 0.16
Vsx1Q91V10 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Vsx1Q91V10 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.08■□□□□ 0.16
Vsx1Q91V10 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.08■□□□□ 0.16
Vsx1Q91V10 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Vsx1Q91V10 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vsx1Q91V10 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vsx1Q91V10 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vsx1Q91V10 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vsx1Q91V10 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vsx1Q91V10 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vsx1Q91V10 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vsx1Q91V10 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vsx1Q91V10 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vsx1Q91V10 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vsx1Q91V10 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vsx1Q91V10 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vsx1Q91V10 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vsx1Q91V10 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.07■□□□□ 0.16
Vsx1Q91V10 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
Vsx1Q91V10 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Vsx1Q91V10 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.07■□□□□ 0.16
Vsx1Q91V10 Gm27628-201ENSMUST00000184911 107 ntBASIC16.07■□□□□ 0.16
Vsx1Q91V10 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.07■□□□□ 0.16
Vsx1Q91V10 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vsx1Q91V10 Gm44430-201ENSMUST00000203376 995 ntBASIC16.07■□□□□ 0.16
Vsx1Q91V10 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vsx1Q91V10 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
Vsx1Q91V10 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vsx1Q91V10 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Vsx1Q91V10 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Vsx1Q91V10 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Vsx1Q91V10 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vsx1Q91V10 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vsx1Q91V10 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vsx1Q91V10 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Vsx1Q91V10 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vsx1Q91V10 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vsx1Q91V10 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.07■□□□□ 0.16
Vsx1Q91V10 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Vsx1Q91V10 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Vsx1Q91V10 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Vsx1Q91V10 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vsx1Q91V10 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Vsx1Q91V10 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vsx1Q91V10 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Vsx1Q91V10 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vsx1Q91V10 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vsx1Q91V10 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.06■□□□□ 0.16
Vsx1Q91V10 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vsx1Q91V10 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Vsx1Q91V10 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vsx1Q91V10 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.06■□□□□ 0.16
Vsx1Q91V10 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Vsx1Q91V10 Gm26308-201ENSMUST00000157768 69 ntBASIC16.06■□□□□ 0.16
Vsx1Q91V10 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.06■□□□□ 0.16
Vsx1Q91V10 AV026068-213ENSMUST00000223675 1171 ntBASIC16.06■□□□□ 0.16
Vsx1Q91V10 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms