Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SfpqQ8VIJ6 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SfpqQ8VIJ6 Actl10-202ENSMUST00000226583 1501 ntBASIC17.22■□□□□ 0.35
SfpqQ8VIJ6 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SfpqQ8VIJ6 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SfpqQ8VIJ6 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.22■□□□□ 0.35
SfpqQ8VIJ6 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SfpqQ8VIJ6 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SfpqQ8VIJ6 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.22■□□□□ 0.35
SfpqQ8VIJ6 Timm23-208ENSMUST00000226683 750 ntBASIC17.22■□□□□ 0.35
SfpqQ8VIJ6 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SfpqQ8VIJ6 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SfpqQ8VIJ6 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SfpqQ8VIJ6 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SfpqQ8VIJ6 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SfpqQ8VIJ6 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SfpqQ8VIJ6 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
SfpqQ8VIJ6 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SfpqQ8VIJ6 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
SfpqQ8VIJ6 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SfpqQ8VIJ6 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.22■□□□□ 0.35
SfpqQ8VIJ6 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SfpqQ8VIJ6 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SfpqQ8VIJ6 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SfpqQ8VIJ6 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SfpqQ8VIJ6 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SfpqQ8VIJ6 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.21■□□□□ 0.35
SfpqQ8VIJ6 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SfpqQ8VIJ6 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SfpqQ8VIJ6 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.21■□□□□ 0.35
SfpqQ8VIJ6 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SfpqQ8VIJ6 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SfpqQ8VIJ6 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SfpqQ8VIJ6 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SfpqQ8VIJ6 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SfpqQ8VIJ6 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SfpqQ8VIJ6 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SfpqQ8VIJ6 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SfpqQ8VIJ6 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SfpqQ8VIJ6 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
SfpqQ8VIJ6 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SfpqQ8VIJ6 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SfpqQ8VIJ6 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SfpqQ8VIJ6 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SfpqQ8VIJ6 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SfpqQ8VIJ6 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SfpqQ8VIJ6 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
SfpqQ8VIJ6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SfpqQ8VIJ6 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SfpqQ8VIJ6 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SfpqQ8VIJ6 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.2■□□□□ 0.34
SfpqQ8VIJ6 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SfpqQ8VIJ6 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.2■□□□□ 0.34
SfpqQ8VIJ6 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SfpqQ8VIJ6 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SfpqQ8VIJ6 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SfpqQ8VIJ6 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SfpqQ8VIJ6 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SfpqQ8VIJ6 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SfpqQ8VIJ6 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SfpqQ8VIJ6 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SfpqQ8VIJ6 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SfpqQ8VIJ6 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SfpqQ8VIJ6 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SfpqQ8VIJ6 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SfpqQ8VIJ6 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SfpqQ8VIJ6 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SfpqQ8VIJ6 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SfpqQ8VIJ6 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SfpqQ8VIJ6 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SfpqQ8VIJ6 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SfpqQ8VIJ6 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SfpqQ8VIJ6 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SfpqQ8VIJ6 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SfpqQ8VIJ6 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SfpqQ8VIJ6 Mir1199-201ENSMUST00000117015 119 ntBASIC17.19■□□□□ 0.34
SfpqQ8VIJ6 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.19■□□□□ 0.34
SfpqQ8VIJ6 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SfpqQ8VIJ6 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SfpqQ8VIJ6 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SfpqQ8VIJ6 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SfpqQ8VIJ6 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SfpqQ8VIJ6 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SfpqQ8VIJ6 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SfpqQ8VIJ6 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SfpqQ8VIJ6 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SfpqQ8VIJ6 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SfpqQ8VIJ6 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SfpqQ8VIJ6 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SfpqQ8VIJ6 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SfpqQ8VIJ6 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SfpqQ8VIJ6 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SfpqQ8VIJ6 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SfpqQ8VIJ6 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SfpqQ8VIJ6 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SfpqQ8VIJ6 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SfpqQ8VIJ6 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SfpqQ8VIJ6 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
SfpqQ8VIJ6 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SfpqQ8VIJ6 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms