Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh18Q8VHR0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh18Q8VHR0 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh18Q8VHR0 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh18Q8VHR0 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh18Q8VHR0 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.74■□□□□ 0.11
Pcdh18Q8VHR0 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh18Q8VHR0 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh18Q8VHR0 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pcdh18Q8VHR0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Pcdh18Q8VHR0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh18Q8VHR0 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.74■□□□□ 0.11
Pcdh18Q8VHR0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pcdh18Q8VHR0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.74■□□□□ 0.11
Pcdh18Q8VHR0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.74■□□□□ 0.11
Pcdh18Q8VHR0 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.74■□□□□ 0.11
Pcdh18Q8VHR0 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pcdh18Q8VHR0 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh18Q8VHR0 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh18Q8VHR0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh18Q8VHR0 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh18Q8VHR0 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Pcdh18Q8VHR0 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh18Q8VHR0 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
Pcdh18Q8VHR0 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh18Q8VHR0 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh18Q8VHR0 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh18Q8VHR0 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh18Q8VHR0 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh18Q8VHR0 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh18Q8VHR0 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh18Q8VHR0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh18Q8VHR0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Pcdh18Q8VHR0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.73■□□□□ 0.11
Pcdh18Q8VHR0 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh18Q8VHR0 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh18Q8VHR0 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh18Q8VHR0 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh18Q8VHR0 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh18Q8VHR0 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Pcdh18Q8VHR0 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh18Q8VHR0 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh18Q8VHR0 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh18Q8VHR0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh18Q8VHR0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh18Q8VHR0 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh18Q8VHR0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh18Q8VHR0 Prob1-201ENSMUST00000097619 3021 ntBASIC15.73■□□□□ 0.11
Pcdh18Q8VHR0 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh18Q8VHR0 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh18Q8VHR0 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Pcdh18Q8VHR0 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh18Q8VHR0 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh18Q8VHR0 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.72■□□□□ 0.11
Pcdh18Q8VHR0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh18Q8VHR0 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.72■□□□□ 0.11
Pcdh18Q8VHR0 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh18Q8VHR0 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Pcdh18Q8VHR0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh18Q8VHR0 Gm24841-201ENSMUST00000158676 357 ntBASIC15.72■□□□□ 0.11
Pcdh18Q8VHR0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh18Q8VHR0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.72■□□□□ 0.11
Pcdh18Q8VHR0 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh18Q8VHR0 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh18Q8VHR0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Pcdh18Q8VHR0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh18Q8VHR0 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.72■□□□□ 0.11
Pcdh18Q8VHR0 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh18Q8VHR0 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh18Q8VHR0 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdh18Q8VHR0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdh18Q8VHR0 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdh18Q8VHR0 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Pcdh18Q8VHR0 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdh18Q8VHR0 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdh18Q8VHR0 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdh18Q8VHR0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdh18Q8VHR0 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdh18Q8VHR0 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdh18Q8VHR0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdh18Q8VHR0 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdh18Q8VHR0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdh18Q8VHR0 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdh18Q8VHR0 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdh18Q8VHR0 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdh18Q8VHR0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.71■□□□□ 0.1
Pcdh18Q8VHR0 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdh18Q8VHR0 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.1
Pcdh18Q8VHR0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Pcdh18Q8VHR0 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh18Q8VHR0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh18Q8VHR0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh18Q8VHR0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh18Q8VHR0 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Pcdh18Q8VHR0 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh18Q8VHR0 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Pcdh18Q8VHR0 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh18Q8VHR0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Pcdh18Q8VHR0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh18Q8VHR0 Gm20760-201ENSMUST00000179197 648 ntBASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms