Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40cQ8VHQ4 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40cQ8VHQ4 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.34□□□□□ -0.27
Rab40cQ8VHQ4 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40cQ8VHQ4 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40cQ8VHQ4 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40cQ8VHQ4 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40cQ8VHQ4 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40cQ8VHQ4 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40cQ8VHQ4 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rab40cQ8VHQ4 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40cQ8VHQ4 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC13.34□□□□□ -0.27
Rab40cQ8VHQ4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC13.34□□□□□ -0.27
Rab40cQ8VHQ4 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40cQ8VHQ4 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40cQ8VHQ4 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40cQ8VHQ4 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40cQ8VHQ4 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40cQ8VHQ4 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40cQ8VHQ4 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40cQ8VHQ4 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rab40cQ8VHQ4 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40cQ8VHQ4 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40cQ8VHQ4 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rab40cQ8VHQ4 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Rab40cQ8VHQ4 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40cQ8VHQ4 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40cQ8VHQ4 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab40cQ8VHQ4 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rab40cQ8VHQ4 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rab40cQ8VHQ4 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Rab40cQ8VHQ4 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rab40cQ8VHQ4 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rab40cQ8VHQ4 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rab40cQ8VHQ4 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40cQ8VHQ4 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40cQ8VHQ4 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rab40cQ8VHQ4 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40cQ8VHQ4 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Rab40cQ8VHQ4 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC13.33□□□□□ -0.28
Rab40cQ8VHQ4 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40cQ8VHQ4 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40cQ8VHQ4 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40cQ8VHQ4 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40cQ8VHQ4 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40cQ8VHQ4 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40cQ8VHQ4 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40cQ8VHQ4 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.33□□□□□ -0.28
Rab40cQ8VHQ4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.33□□□□□ -0.28
Rab40cQ8VHQ4 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.33□□□□□ -0.28
Rab40cQ8VHQ4 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40cQ8VHQ4 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40cQ8VHQ4 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40cQ8VHQ4 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40cQ8VHQ4 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.33□□□□□ -0.28
Rab40cQ8VHQ4 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40cQ8VHQ4 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40cQ8VHQ4 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40cQ8VHQ4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40cQ8VHQ4 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40cQ8VHQ4 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40cQ8VHQ4 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40cQ8VHQ4 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40cQ8VHQ4 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab40cQ8VHQ4 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rab40cQ8VHQ4 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 Asic1-205ENSMUST00000228185 1818 ntBASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rab40cQ8VHQ4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms