Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gm37292-201ENSMUST00000192062 758 ntBASIC16.46■□□□□ 0.23
Rpa1Q8VEE4 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.46■□□□□ 0.23
Rpa1Q8VEE4 Gm37025-201ENSMUST00000195159 829 ntBASIC16.46■□□□□ 0.23
Rpa1Q8VEE4 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rpa1Q8VEE4 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rpa1Q8VEE4 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rpa1Q8VEE4 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rpa1Q8VEE4 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rpa1Q8VEE4 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rpa1Q8VEE4 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rpa1Q8VEE4 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rpa1Q8VEE4 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rpa1Q8VEE4 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Rpa1Q8VEE4 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rpa1Q8VEE4 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rpa1Q8VEE4 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Rpa1Q8VEE4 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rpa1Q8VEE4 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
Rpa1Q8VEE4 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rpa1Q8VEE4 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
Rpa1Q8VEE4 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rpa1Q8VEE4 Gm12896-201ENSMUST00000118430 226 ntBASIC16.45■□□□□ 0.22
Rpa1Q8VEE4 Gm13158-201ENSMUST00000122007 736 ntBASIC16.45■□□□□ 0.22
Rpa1Q8VEE4 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.45■□□□□ 0.22
Rpa1Q8VEE4 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rpa1Q8VEE4 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rpa1Q8VEE4 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.45■□□□□ 0.22
Rpa1Q8VEE4 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rpa1Q8VEE4 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rpa1Q8VEE4 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Rpa1Q8VEE4 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Rpa1Q8VEE4 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rpa1Q8VEE4 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rpa1Q8VEE4 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rpa1Q8VEE4 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rpa1Q8VEE4 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.45■□□□□ 0.22
Rpa1Q8VEE4 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Rpa1Q8VEE4 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rpa1Q8VEE4 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.44■□□□□ 0.22
Rpa1Q8VEE4 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rpa1Q8VEE4 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rpa1Q8VEE4 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Rpa1Q8VEE4 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Rpa1Q8VEE4 Gm12382-201ENSMUST00000122005 922 ntBASIC16.44■□□□□ 0.22
Rpa1Q8VEE4 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rpa1Q8VEE4 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.44■□□□□ 0.22
Rpa1Q8VEE4 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rpa1Q8VEE4 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rpa1Q8VEE4 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rpa1Q8VEE4 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rpa1Q8VEE4 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rpa1Q8VEE4 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rpa1Q8VEE4 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.44■□□□□ 0.22
Rpa1Q8VEE4 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rpa1Q8VEE4 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Rpa1Q8VEE4 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rpa1Q8VEE4 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rpa1Q8VEE4 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rpa1Q8VEE4 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.43■□□□□ 0.22
Rpa1Q8VEE4 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rpa1Q8VEE4 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rpa1Q8VEE4 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rpa1Q8VEE4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.43■□□□□ 0.22
Rpa1Q8VEE4 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.43■□□□□ 0.22
Rpa1Q8VEE4 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rpa1Q8VEE4 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rpa1Q8VEE4 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Rpa1Q8VEE4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rpa1Q8VEE4 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rpa1Q8VEE4 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rpa1Q8VEE4 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rpa1Q8VEE4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rpa1Q8VEE4 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rpa1Q8VEE4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rpa1Q8VEE4 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rpa1Q8VEE4 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rpa1Q8VEE4 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rpa1Q8VEE4 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rpa1Q8VEE4 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rpa1Q8VEE4 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rpa1Q8VEE4 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rpa1Q8VEE4 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.42■□□□□ 0.22
Rpa1Q8VEE4 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rpa1Q8VEE4 Gm12441-201ENSMUST00000121806 588 ntBASIC16.42■□□□□ 0.22
Rpa1Q8VEE4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Rpa1Q8VEE4 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.42■□□□□ 0.22
Rpa1Q8VEE4 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rpa1Q8VEE4 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.42■□□□□ 0.22
Rpa1Q8VEE4 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rpa1Q8VEE4 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Rpa1Q8VEE4 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Rpa1Q8VEE4 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rpa1Q8VEE4 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rpa1Q8VEE4 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rpa1Q8VEE4 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rpa1Q8VEE4 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rpa1Q8VEE4 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Rpa1Q8VEE4 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rpa1Q8VEE4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Rpa1Q8VEE4 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms