Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lmcd1Q8VEE1 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lmcd1Q8VEE1 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lmcd1Q8VEE1 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lmcd1Q8VEE1 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Lmcd1Q8VEE1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lmcd1Q8VEE1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.29■□□□□ 0.36
Lmcd1Q8VEE1 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lmcd1Q8VEE1 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lmcd1Q8VEE1 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lmcd1Q8VEE1 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Lmcd1Q8VEE1 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Lmcd1Q8VEE1 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lmcd1Q8VEE1 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.29■□□□□ 0.36
Lmcd1Q8VEE1 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lmcd1Q8VEE1 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lmcd1Q8VEE1 Gm27646-201ENSMUST00000183989 110 ntBASIC17.29■□□□□ 0.36
Lmcd1Q8VEE1 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Lmcd1Q8VEE1 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lmcd1Q8VEE1 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lmcd1Q8VEE1 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lmcd1Q8VEE1 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lmcd1Q8VEE1 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.29■□□□□ 0.36
Lmcd1Q8VEE1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lmcd1Q8VEE1 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.29■□□□□ 0.36
Lmcd1Q8VEE1 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lmcd1Q8VEE1 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lmcd1Q8VEE1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lmcd1Q8VEE1 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lmcd1Q8VEE1 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lmcd1Q8VEE1 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Lmcd1Q8VEE1 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lmcd1Q8VEE1 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Lmcd1Q8VEE1 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Lmcd1Q8VEE1 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.28■□□□□ 0.36
Lmcd1Q8VEE1 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.28■□□□□ 0.36
Lmcd1Q8VEE1 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.28■□□□□ 0.36
Lmcd1Q8VEE1 Gm44492-201ENSMUST00000197012 141 ntBASIC17.28■□□□□ 0.36
Lmcd1Q8VEE1 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lmcd1Q8VEE1 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.28■□□□□ 0.36
Lmcd1Q8VEE1 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lmcd1Q8VEE1 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.28■□□□□ 0.36
Lmcd1Q8VEE1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Lmcd1Q8VEE1 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Lmcd1Q8VEE1 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lmcd1Q8VEE1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lmcd1Q8VEE1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lmcd1Q8VEE1 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lmcd1Q8VEE1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Lmcd1Q8VEE1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lmcd1Q8VEE1 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lmcd1Q8VEE1 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.27■□□□□ 0.36
Lmcd1Q8VEE1 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lmcd1Q8VEE1 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.27■□□□□ 0.36
Lmcd1Q8VEE1 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lmcd1Q8VEE1 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.27■□□□□ 0.36
Lmcd1Q8VEE1 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lmcd1Q8VEE1 AC140375.2-201ENSMUST00000225283 584 ntBASIC17.27■□□□□ 0.36
Lmcd1Q8VEE1 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lmcd1Q8VEE1 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Lmcd1Q8VEE1 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lmcd1Q8VEE1 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.27■□□□□ 0.36
Lmcd1Q8VEE1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Lmcd1Q8VEE1 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Lmcd1Q8VEE1 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lmcd1Q8VEE1 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lmcd1Q8VEE1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.27■□□□□ 0.35
Lmcd1Q8VEE1 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lmcd1Q8VEE1 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lmcd1Q8VEE1 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
Lmcd1Q8VEE1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lmcd1Q8VEE1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Lmcd1Q8VEE1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
Lmcd1Q8VEE1 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lmcd1Q8VEE1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lmcd1Q8VEE1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lmcd1Q8VEE1 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lmcd1Q8VEE1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lmcd1Q8VEE1 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lmcd1Q8VEE1 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lmcd1Q8VEE1 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lmcd1Q8VEE1 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lmcd1Q8VEE1 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.26■□□□□ 0.35
Lmcd1Q8VEE1 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lmcd1Q8VEE1 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Lmcd1Q8VEE1 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.26■□□□□ 0.35
Lmcd1Q8VEE1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lmcd1Q8VEE1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.26■□□□□ 0.35
Lmcd1Q8VEE1 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lmcd1Q8VEE1 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lmcd1Q8VEE1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lmcd1Q8VEE1 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lmcd1Q8VEE1 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lmcd1Q8VEE1 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lmcd1Q8VEE1 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lmcd1Q8VEE1 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Lmcd1Q8VEE1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lmcd1Q8VEE1 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lmcd1Q8VEE1 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lmcd1Q8VEE1 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms