Protein–RNA interactions for Protein: Q8VE18

Smg8, Protein SMG8, mousemouse

Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg8Q8VE18 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.33■□□□□ 0.36
Smg8Q8VE18 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smg8Q8VE18 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smg8Q8VE18 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Smg8Q8VE18 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.32■□□□□ 0.36
Smg8Q8VE18 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smg8Q8VE18 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smg8Q8VE18 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smg8Q8VE18 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smg8Q8VE18 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.32■□□□□ 0.36
Smg8Q8VE18 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Smg8Q8VE18 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smg8Q8VE18 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smg8Q8VE18 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.32■□□□□ 0.36
Smg8Q8VE18 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smg8Q8VE18 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smg8Q8VE18 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smg8Q8VE18 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smg8Q8VE18 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smg8Q8VE18 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.32■□□□□ 0.36
Smg8Q8VE18 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smg8Q8VE18 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Smg8Q8VE18 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smg8Q8VE18 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smg8Q8VE18 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.31■□□□□ 0.36
Smg8Q8VE18 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smg8Q8VE18 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.31■□□□□ 0.36
Smg8Q8VE18 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.31■□□□□ 0.36
Smg8Q8VE18 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smg8Q8VE18 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smg8Q8VE18 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smg8Q8VE18 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Smg8Q8VE18 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smg8Q8VE18 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.31■□□□□ 0.36
Smg8Q8VE18 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.31■□□□□ 0.36
Smg8Q8VE18 Gm2651-201ENSMUST00000203560 838 ntBASIC17.31■□□□□ 0.36
Smg8Q8VE18 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Smg8Q8VE18 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smg8Q8VE18 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.31■□□□□ 0.36
Smg8Q8VE18 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smg8Q8VE18 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smg8Q8VE18 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smg8Q8VE18 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smg8Q8VE18 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smg8Q8VE18 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.31■□□□□ 0.36
Smg8Q8VE18 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smg8Q8VE18 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smg8Q8VE18 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smg8Q8VE18 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smg8Q8VE18 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smg8Q8VE18 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smg8Q8VE18 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.3■□□□□ 0.36
Smg8Q8VE18 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smg8Q8VE18 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.3■□□□□ 0.36
Smg8Q8VE18 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smg8Q8VE18 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smg8Q8VE18 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smg8Q8VE18 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.3■□□□□ 0.36
Smg8Q8VE18 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.3■□□□□ 0.36
Smg8Q8VE18 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.3■□□□□ 0.36
Smg8Q8VE18 Gm43514-201ENSMUST00000198852 424 ntBASIC17.3■□□□□ 0.36
Smg8Q8VE18 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smg8Q8VE18 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smg8Q8VE18 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smg8Q8VE18 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smg8Q8VE18 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Smg8Q8VE18 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smg8Q8VE18 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smg8Q8VE18 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smg8Q8VE18 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smg8Q8VE18 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Smg8Q8VE18 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Smg8Q8VE18 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.29■□□□□ 0.36
Smg8Q8VE18 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smg8Q8VE18 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smg8Q8VE18 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smg8Q8VE18 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smg8Q8VE18 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smg8Q8VE18 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smg8Q8VE18 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smg8Q8VE18 Mir5131-201ENSMUST00000175426 93 ntBASIC17.29■□□□□ 0.36
Smg8Q8VE18 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Smg8Q8VE18 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smg8Q8VE18 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.29■□□□□ 0.36
Smg8Q8VE18 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smg8Q8VE18 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smg8Q8VE18 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smg8Q8VE18 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smg8Q8VE18 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Smg8Q8VE18 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smg8Q8VE18 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smg8Q8VE18 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smg8Q8VE18 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smg8Q8VE18 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Smg8Q8VE18 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Smg8Q8VE18 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smg8Q8VE18 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.29■□□□□ 0.36
Smg8Q8VE18 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smg8Q8VE18 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smg8Q8VE18 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms