Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.36■□□□□ 0.05
Ndc1Q8VCB1 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.36■□□□□ 0.05
Ndc1Q8VCB1 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Ndc1Q8VCB1 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.36■□□□□ 0.05
Ndc1Q8VCB1 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.36■□□□□ 0.05
Ndc1Q8VCB1 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Ndc1Q8VCB1 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.36■□□□□ 0.05
Ndc1Q8VCB1 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
Ndc1Q8VCB1 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ndc1Q8VCB1 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ndc1Q8VCB1 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ndc1Q8VCB1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ndc1Q8VCB1 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ndc1Q8VCB1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ndc1Q8VCB1 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ndc1Q8VCB1 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Ndc1Q8VCB1 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ndc1Q8VCB1 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Ndc1Q8VCB1 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ndc1Q8VCB1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Ndc1Q8VCB1 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ndc1Q8VCB1 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ndc1Q8VCB1 Gm13216-201ENSMUST00000117145 591 ntBASIC15.35■□□□□ 0.05
Ndc1Q8VCB1 Gm12895-201ENSMUST00000122214 226 ntBASIC15.35■□□□□ 0.05
Ndc1Q8VCB1 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.35■□□□□ 0.05
Ndc1Q8VCB1 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.35■□□□□ 0.05
Ndc1Q8VCB1 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ndc1Q8VCB1 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ndc1Q8VCB1 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Ndc1Q8VCB1 Gm34391-201ENSMUST00000203706 907 ntBASIC15.35■□□□□ 0.05
Ndc1Q8VCB1 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ndc1Q8VCB1 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ndc1Q8VCB1 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ndc1Q8VCB1 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.35■□□□□ 0.05
Ndc1Q8VCB1 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Ndc1Q8VCB1 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ndc1Q8VCB1 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.35■□□□□ 0.05
Ndc1Q8VCB1 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ndc1Q8VCB1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ndc1Q8VCB1 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ndc1Q8VCB1 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ndc1Q8VCB1 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ndc1Q8VCB1 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ndc1Q8VCB1 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.34■□□□□ 0.05
Ndc1Q8VCB1 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ndc1Q8VCB1 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ndc1Q8VCB1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ndc1Q8VCB1 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ndc1Q8VCB1 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ndc1Q8VCB1 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.34■□□□□ 0.05
Ndc1Q8VCB1 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ndc1Q8VCB1 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.34■□□□□ 0.05
Ndc1Q8VCB1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ndc1Q8VCB1 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ndc1Q8VCB1 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ndc1Q8VCB1 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ndc1Q8VCB1 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ndc1Q8VCB1 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ndc1Q8VCB1 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ndc1Q8VCB1 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ndc1Q8VCB1 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ndc1Q8VCB1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ndc1Q8VCB1 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ndc1Q8VCB1 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ndc1Q8VCB1 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ndc1Q8VCB1 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Ndc1Q8VCB1 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ndc1Q8VCB1 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ndc1Q8VCB1 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ndc1Q8VCB1 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndc1Q8VCB1 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ndc1Q8VCB1 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndc1Q8VCB1 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ndc1Q8VCB1 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ndc1Q8VCB1 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.33■□□□□ 0.04
Ndc1Q8VCB1 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
Ndc1Q8VCB1 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ndc1Q8VCB1 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ndc1Q8VCB1 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ndc1Q8VCB1 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.33■□□□□ 0.04
Ndc1Q8VCB1 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.33■□□□□ 0.04
Ndc1Q8VCB1 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndc1Q8VCB1 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndc1Q8VCB1 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ndc1Q8VCB1 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndc1Q8VCB1 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndc1Q8VCB1 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndc1Q8VCB1 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndc1Q8VCB1 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ndc1Q8VCB1 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndc1Q8VCB1 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndc1Q8VCB1 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ndc1Q8VCB1 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Ndc1Q8VCB1 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ndc1Q8VCB1 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc1Q8VCB1 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.32■□□□□ 0.04
Ndc1Q8VCB1 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc1Q8VCB1 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ndc1Q8VCB1 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Ndc1Q8VCB1 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms