Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpap2Q8VC34 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Rpap2Q8VC34 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rpap2Q8VC34 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpap2Q8VC34 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Rpap2Q8VC34 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpap2Q8VC34 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpap2Q8VC34 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpap2Q8VC34 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Rpap2Q8VC34 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpap2Q8VC34 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpap2Q8VC34 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpap2Q8VC34 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpap2Q8VC34 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpap2Q8VC34 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rpap2Q8VC34 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rpap2Q8VC34 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpap2Q8VC34 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
Rpap2Q8VC34 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.88■□□□□ 0.45
Rpap2Q8VC34 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rpap2Q8VC34 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rpap2Q8VC34 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpap2Q8VC34 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpap2Q8VC34 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpap2Q8VC34 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpap2Q8VC34 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpap2Q8VC34 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpap2Q8VC34 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpap2Q8VC34 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpap2Q8VC34 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpap2Q8VC34 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.88■□□□□ 0.45
Rpap2Q8VC34 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpap2Q8VC34 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Rpap2Q8VC34 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpap2Q8VC34 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpap2Q8VC34 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.87■□□□□ 0.45
Rpap2Q8VC34 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.87■□□□□ 0.45
Rpap2Q8VC34 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpap2Q8VC34 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Rpap2Q8VC34 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpap2Q8VC34 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpap2Q8VC34 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rpap2Q8VC34 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpap2Q8VC34 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.87■□□□□ 0.45
Rpap2Q8VC34 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpap2Q8VC34 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpap2Q8VC34 Gm15794-201ENSMUST00000120182 631 ntBASIC17.87■□□□□ 0.45
Rpap2Q8VC34 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpap2Q8VC34 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpap2Q8VC34 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpap2Q8VC34 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpap2Q8VC34 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Rpap2Q8VC34 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpap2Q8VC34 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpap2Q8VC34 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.87■□□□□ 0.45
Rpap2Q8VC34 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpap2Q8VC34 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpap2Q8VC34 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpap2Q8VC34 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rpap2Q8VC34 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpap2Q8VC34 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Rpap2Q8VC34 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpap2Q8VC34 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rpap2Q8VC34 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rpap2Q8VC34 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rpap2Q8VC34 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.86■□□□□ 0.45
Rpap2Q8VC34 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
Rpap2Q8VC34 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rpap2Q8VC34 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rpap2Q8VC34 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rpap2Q8VC34 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Rpap2Q8VC34 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.86■□□□□ 0.45
Rpap2Q8VC34 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
Rpap2Q8VC34 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rpap2Q8VC34 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rpap2Q8VC34 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.86■□□□□ 0.45
Rpap2Q8VC34 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rpap2Q8VC34 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.86■□□□□ 0.45
Rpap2Q8VC34 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Rpap2Q8VC34 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.86■□□□□ 0.45
Rpap2Q8VC34 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Rpap2Q8VC34 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Rpap2Q8VC34 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rpap2Q8VC34 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.85■□□□□ 0.45
Rpap2Q8VC34 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rpap2Q8VC34 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rpap2Q8VC34 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.85■□□□□ 0.45
Rpap2Q8VC34 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.85■□□□□ 0.45
Rpap2Q8VC34 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rpap2Q8VC34 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rpap2Q8VC34 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rpap2Q8VC34 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rpap2Q8VC34 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rpap2Q8VC34 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpap2Q8VC34 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rpap2Q8VC34 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.84■□□□□ 0.45
Rpap2Q8VC34 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rpap2Q8VC34 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpap2Q8VC34 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpap2Q8VC34 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms