Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nup35Q8R4R6 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup35Q8R4R6 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup35Q8R4R6 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup35Q8R4R6 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nup35Q8R4R6 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup35Q8R4R6 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup35Q8R4R6 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup35Q8R4R6 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Nup35Q8R4R6 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Nup35Q8R4R6 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Nup35Q8R4R6 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup35Q8R4R6 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Nup35Q8R4R6 Asic1-205ENSMUST00000228185 1818 ntBASIC13.32□□□□□ -0.28
Nup35Q8R4R6 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup35Q8R4R6 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.32□□□□□ -0.28
Nup35Q8R4R6 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup35Q8R4R6 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nup35Q8R4R6 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup35Q8R4R6 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.32□□□□□ -0.28
Nup35Q8R4R6 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Nup35Q8R4R6 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup35Q8R4R6 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.32□□□□□ -0.28
Nup35Q8R4R6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
Nup35Q8R4R6 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.32□□□□□ -0.28
Nup35Q8R4R6 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Nup35Q8R4R6 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nup35Q8R4R6 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup35Q8R4R6 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Nup35Q8R4R6 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup35Q8R4R6 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nup35Q8R4R6 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.32□□□□□ -0.28
Nup35Q8R4R6 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup35Q8R4R6 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup35Q8R4R6 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup35Q8R4R6 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.32□□□□□ -0.28
Nup35Q8R4R6 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nup35Q8R4R6 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup35Q8R4R6 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Nup35Q8R4R6 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup35Q8R4R6 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup35Q8R4R6 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.31□□□□□ -0.28
Nup35Q8R4R6 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup35Q8R4R6 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.31□□□□□ -0.28
Nup35Q8R4R6 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nup35Q8R4R6 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup35Q8R4R6 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Nup35Q8R4R6 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.31□□□□□ -0.28
Nup35Q8R4R6 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup35Q8R4R6 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Nup35Q8R4R6 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nup35Q8R4R6 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC13.31□□□□□ -0.28
Nup35Q8R4R6 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup35Q8R4R6 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Nup35Q8R4R6 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nup35Q8R4R6 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nup35Q8R4R6 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup35Q8R4R6 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup35Q8R4R6 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup35Q8R4R6 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup35Q8R4R6 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.31□□□□□ -0.28
Nup35Q8R4R6 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.31□□□□□ -0.28
Nup35Q8R4R6 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup35Q8R4R6 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nup35Q8R4R6 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup35Q8R4R6 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nup35Q8R4R6 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup35Q8R4R6 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.3□□□□□ -0.28
Nup35Q8R4R6 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup35Q8R4R6 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup35Q8R4R6 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup35Q8R4R6 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup35Q8R4R6 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.3□□□□□ -0.28
Nup35Q8R4R6 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup35Q8R4R6 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC13.3□□□□□ -0.28
Nup35Q8R4R6 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nup35Q8R4R6 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Nup35Q8R4R6 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.3□□□□□ -0.28
Nup35Q8R4R6 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup35Q8R4R6 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Nup35Q8R4R6 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup35Q8R4R6 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup35Q8R4R6 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Nup35Q8R4R6 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup35Q8R4R6 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup35Q8R4R6 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nup35Q8R4R6 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup35Q8R4R6 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nup35Q8R4R6 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup35Q8R4R6 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup35Q8R4R6 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Nup35Q8R4R6 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nup35Q8R4R6 Actl10-202ENSMUST00000226583 1501 ntBASIC13.29□□□□□ -0.28
Nup35Q8R4R6 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup35Q8R4R6 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup35Q8R4R6 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Nup35Q8R4R6 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup35Q8R4R6 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nup35Q8R4R6 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nup35Q8R4R6 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms