Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp2a1Q8R429 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp2a1Q8R429 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp2a1Q8R429 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.17■□□□□ 0.5
Atp2a1Q8R429 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp2a1Q8R429 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Atp2a1Q8R429 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Atp2a1Q8R429 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp2a1Q8R429 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp2a1Q8R429 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp2a1Q8R429 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp2a1Q8R429 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atp2a1Q8R429 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atp2a1Q8R429 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atp2a1Q8R429 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atp2a1Q8R429 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.16■□□□□ 0.5
Atp2a1Q8R429 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atp2a1Q8R429 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.16■□□□□ 0.5
Atp2a1Q8R429 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.16■□□□□ 0.5
Atp2a1Q8R429 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Atp2a1Q8R429 Gm18195-201ENSMUST00000207604 706 ntBASIC18.16■□□□□ 0.5
Atp2a1Q8R429 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Atp2a1Q8R429 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atp2a1Q8R429 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atp2a1Q8R429 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Atp2a1Q8R429 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Atp2a1Q8R429 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Atp2a1Q8R429 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Atp2a1Q8R429 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Atp2a1Q8R429 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atp2a1Q8R429 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atp2a1Q8R429 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atp2a1Q8R429 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Atp2a1Q8R429 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.15■□□□□ 0.5
Atp2a1Q8R429 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.15■□□□□ 0.5
Atp2a1Q8R429 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.15■□□□□ 0.5
Atp2a1Q8R429 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Atp2a1Q8R429 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Atp2a1Q8R429 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atp2a1Q8R429 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.15■□□□□ 0.5
Atp2a1Q8R429 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Atp2a1Q8R429 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Atp2a1Q8R429 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Atp2a1Q8R429 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Atp2a1Q8R429 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Atp2a1Q8R429 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Atp2a1Q8R429 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atp2a1Q8R429 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Atp2a1Q8R429 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Atp2a1Q8R429 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atp2a1Q8R429 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Atp2a1Q8R429 Gm6443-201ENSMUST00000203599 874 ntBASIC18.14■□□□□ 0.49
Atp2a1Q8R429 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atp2a1Q8R429 Gm6296-201ENSMUST00000222599 943 ntBASIC18.14■□□□□ 0.49
Atp2a1Q8R429 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.14■□□□□ 0.49
Atp2a1Q8R429 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.14■□□□□ 0.49
Atp2a1Q8R429 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Atp2a1Q8R429 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.14■□□□□ 0.49
Atp2a1Q8R429 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atp2a1Q8R429 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atp2a1Q8R429 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Atp2a1Q8R429 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Atp2a1Q8R429 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atp2a1Q8R429 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Atp2a1Q8R429 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Atp2a1Q8R429 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.14■□□□□ 0.49
Atp2a1Q8R429 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.13■□□□□ 0.49
Atp2a1Q8R429 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp2a1Q8R429 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp2a1Q8R429 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp2a1Q8R429 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Atp2a1Q8R429 Gm43514-201ENSMUST00000198852 424 ntBASIC18.13■□□□□ 0.49
Atp2a1Q8R429 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.13■□□□□ 0.49
Atp2a1Q8R429 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Atp2a1Q8R429 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp2a1Q8R429 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp2a1Q8R429 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp2a1Q8R429 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp2a1Q8R429 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Atp2a1Q8R429 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp2a1Q8R429 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp2a1Q8R429 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Atp2a1Q8R429 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Atp2a1Q8R429 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp2a1Q8R429 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp2a1Q8R429 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp2a1Q8R429 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp2a1Q8R429 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp2a1Q8R429 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp2a1Q8R429 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Atp2a1Q8R429 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp2a1Q8R429 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.12■□□□□ 0.49
Atp2a1Q8R429 Gm18733-201ENSMUST00000173950 856 ntBASIC18.12■□□□□ 0.49
Atp2a1Q8R429 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.12■□□□□ 0.49
Atp2a1Q8R429 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.12■□□□□ 0.49
Atp2a1Q8R429 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp2a1Q8R429 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp2a1Q8R429 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Atp2a1Q8R429 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp2a1Q8R429 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms