Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp7Q8R1T1 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp7Q8R1T1 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp7Q8R1T1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
Chmp7Q8R1T1 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp7Q8R1T1 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp7Q8R1T1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.8■□□□□ 0.92
Chmp7Q8R1T1 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp7Q8R1T1 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp7Q8R1T1 Gm2213-201ENSMUST00000197485 688 ntBASIC20.8■□□□□ 0.92
Chmp7Q8R1T1 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp7Q8R1T1 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp7Q8R1T1 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp7Q8R1T1 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp7Q8R1T1 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp7Q8R1T1 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp7Q8R1T1 Gm6858-201ENSMUST00000208582 1468 ntBASIC20.8■□□□□ 0.92
Chmp7Q8R1T1 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp7Q8R1T1 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp7Q8R1T1 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC20.8■□□□□ 0.92
Chmp7Q8R1T1 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp7Q8R1T1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.79■□□□□ 0.92
Chmp7Q8R1T1 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Chmp7Q8R1T1 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp7Q8R1T1 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Chmp7Q8R1T1 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Chmp7Q8R1T1 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp7Q8R1T1 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Chmp7Q8R1T1 Gm5264-201ENSMUST00000190584 848 ntBASIC20.79■□□□□ 0.92
Chmp7Q8R1T1 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp7Q8R1T1 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC20.79■□□□□ 0.92
Chmp7Q8R1T1 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp7Q8R1T1 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC20.79■□□□□ 0.92
Chmp7Q8R1T1 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp7Q8R1T1 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp7Q8R1T1 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC20.78■□□□□ 0.92
Chmp7Q8R1T1 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.78■□□□□ 0.92
Chmp7Q8R1T1 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp7Q8R1T1 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp7Q8R1T1 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp7Q8R1T1 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC20.78■□□□□ 0.92
Chmp7Q8R1T1 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp7Q8R1T1 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp7Q8R1T1 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC20.78■□□□□ 0.92
Chmp7Q8R1T1 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp7Q8R1T1 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp7Q8R1T1 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Chmp7Q8R1T1 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC20.77■□□□□ 0.92
Chmp7Q8R1T1 AC132265.1-201ENSMUST00000219233 1665 ntBASIC20.77■□□□□ 0.92
Chmp7Q8R1T1 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp7Q8R1T1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
Chmp7Q8R1T1 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp7Q8R1T1 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp7Q8R1T1 Gm15467-201ENSMUST00000120582 445 ntBASIC20.77■□□□□ 0.92
Chmp7Q8R1T1 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC20.77■□□□□ 0.92
Chmp7Q8R1T1 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Chmp7Q8R1T1 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC20.77■□□□□ 0.92
Chmp7Q8R1T1 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC20.77■□□□□ 0.92
Chmp7Q8R1T1 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Chmp7Q8R1T1 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp7Q8R1T1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Chmp7Q8R1T1 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Chmp7Q8R1T1 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC20.77■□□□□ 0.91
Chmp7Q8R1T1 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp7Q8R1T1 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp7Q8R1T1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC20.76■□□□□ 0.91
Chmp7Q8R1T1 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp7Q8R1T1 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp7Q8R1T1 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp7Q8R1T1 Gm7222-201ENSMUST00000117512 906 ntBASIC20.76■□□□□ 0.91
Chmp7Q8R1T1 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC20.76■□□□□ 0.91
Chmp7Q8R1T1 AC154222.1-201ENSMUST00000223882 475 ntBASIC20.76■□□□□ 0.91
Chmp7Q8R1T1 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp7Q8R1T1 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.75■□□□□ 0.91
Chmp7Q8R1T1 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp7Q8R1T1 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp7Q8R1T1 Rarb-207ENSMUST00000225921 2756 ntBASIC20.75■□□□□ 0.91
Chmp7Q8R1T1 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.75■□□□□ 0.91
Chmp7Q8R1T1 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp7Q8R1T1 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Chmp7Q8R1T1 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Chmp7Q8R1T1 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC20.75■□□□□ 0.91
Chmp7Q8R1T1 Gm6184-201ENSMUST00000120403 1261 ntBASIC20.75■□□□□ 0.91
Chmp7Q8R1T1 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp7Q8R1T1 Gm25925-201ENSMUST00000158314 306 ntBASIC20.75■□□□□ 0.91
Chmp7Q8R1T1 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC20.75■□□□□ 0.91
Chmp7Q8R1T1 Gm42670-201ENSMUST00000201816 1292 ntBASIC20.75■□□□□ 0.91
Chmp7Q8R1T1 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp7Q8R1T1 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC20.75■□□□□ 0.91
Chmp7Q8R1T1 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC20.75■□□□□ 0.91
Chmp7Q8R1T1 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp7Q8R1T1 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC20.75■□□□□ 0.91
Chmp7Q8R1T1 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp7Q8R1T1 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp7Q8R1T1 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp7Q8R1T1 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp7Q8R1T1 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp7Q8R1T1 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp7Q8R1T1 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp7Q8R1T1 Gm3928-201ENSMUST00000121141 1307 ntBASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms