Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.92■□□□□ 0.78
Sf3a1Q8K4Z5 Gm10052-201ENSMUST00000168019 960 ntBASIC19.92■□□□□ 0.78
Sf3a1Q8K4Z5 Gm27742-201ENSMUST00000184667 60 ntBASIC19.92■□□□□ 0.78
Sf3a1Q8K4Z5 Gm44430-201ENSMUST00000203376 995 ntBASIC19.92■□□□□ 0.78
Sf3a1Q8K4Z5 Gm7729-201ENSMUST00000050143 801 ntBASIC19.92■□□□□ 0.78
Sf3a1Q8K4Z5 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sf3a1Q8K4Z5 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sf3a1Q8K4Z5 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Sf3a1Q8K4Z5 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sf3a1Q8K4Z5 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.92■□□□□ 0.78
Sf3a1Q8K4Z5 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sf3a1Q8K4Z5 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sf3a1Q8K4Z5 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sf3a1Q8K4Z5 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sf3a1Q8K4Z5 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sf3a1Q8K4Z5 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Sf3a1Q8K4Z5 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sf3a1Q8K4Z5 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sf3a1Q8K4Z5 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sf3a1Q8K4Z5 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sf3a1Q8K4Z5 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.92■□□□□ 0.78
Sf3a1Q8K4Z5 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Sf3a1Q8K4Z5 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sf3a1Q8K4Z5 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.91■□□□□ 0.78
Sf3a1Q8K4Z5 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sf3a1Q8K4Z5 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sf3a1Q8K4Z5 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.91■□□□□ 0.78
Sf3a1Q8K4Z5 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
Sf3a1Q8K4Z5 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sf3a1Q8K4Z5 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.91■□□□□ 0.78
Sf3a1Q8K4Z5 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Sf3a1Q8K4Z5 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sf3a1Q8K4Z5 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.91■□□□□ 0.78
Sf3a1Q8K4Z5 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sf3a1Q8K4Z5 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sf3a1Q8K4Z5 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.91■□□□□ 0.78
Sf3a1Q8K4Z5 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sf3a1Q8K4Z5 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sf3a1Q8K4Z5 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sf3a1Q8K4Z5 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sf3a1Q8K4Z5 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sf3a1Q8K4Z5 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sf3a1Q8K4Z5 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sf3a1Q8K4Z5 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.9■□□□□ 0.78
Sf3a1Q8K4Z5 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sf3a1Q8K4Z5 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sf3a1Q8K4Z5 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sf3a1Q8K4Z5 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.9■□□□□ 0.78
Sf3a1Q8K4Z5 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sf3a1Q8K4Z5 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sf3a1Q8K4Z5 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Sf3a1Q8K4Z5 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Sf3a1Q8K4Z5 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sf3a1Q8K4Z5 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.9■□□□□ 0.78
Sf3a1Q8K4Z5 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sf3a1Q8K4Z5 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
Sf3a1Q8K4Z5 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC19.9■□□□□ 0.78
Sf3a1Q8K4Z5 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sf3a1Q8K4Z5 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sf3a1Q8K4Z5 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Sf3a1Q8K4Z5 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sf3a1Q8K4Z5 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sf3a1Q8K4Z5 Gm14859-201ENSMUST00000117752 357 ntBASIC19.89■□□□□ 0.77
Sf3a1Q8K4Z5 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Sf3a1Q8K4Z5 Gm21362-201ENSMUST00000194272 928 ntBASIC19.89■□□□□ 0.77
Sf3a1Q8K4Z5 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
Sf3a1Q8K4Z5 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sf3a1Q8K4Z5 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sf3a1Q8K4Z5 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sf3a1Q8K4Z5 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Sf3a1Q8K4Z5 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sf3a1Q8K4Z5 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sf3a1Q8K4Z5 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Sf3a1Q8K4Z5 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3a1Q8K4Z5 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Sf3a1Q8K4Z5 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Sf3a1Q8K4Z5 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3a1Q8K4Z5 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3a1Q8K4Z5 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3a1Q8K4Z5 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3a1Q8K4Z5 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
Sf3a1Q8K4Z5 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3a1Q8K4Z5 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Sf3a1Q8K4Z5 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3a1Q8K4Z5 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3a1Q8K4Z5 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3a1Q8K4Z5 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Sf3a1Q8K4Z5 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3a1Q8K4Z5 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3a1Q8K4Z5 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Sf3a1Q8K4Z5 Gm7367-201ENSMUST00000057611 492 ntBASIC19.88■□□□□ 0.77
Sf3a1Q8K4Z5 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3a1Q8K4Z5 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3a1Q8K4Z5 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3a1Q8K4Z5 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3a1Q8K4Z5 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3a1Q8K4Z5 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3a1Q8K4Z5 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3a1Q8K4Z5 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3a1Q8K4Z5 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms