Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Alms1Q8K4E0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Alms1Q8K4E0 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Alms1Q8K4E0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Alms1Q8K4E0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Alms1Q8K4E0 Gm4535-201ENSMUST00000182274 558 ntBASIC15.9■□□□□ 0.14
Alms1Q8K4E0 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Alms1Q8K4E0 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Alms1Q8K4E0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Alms1Q8K4E0 Gm10355-201ENSMUST00000097146 517 ntBASIC15.9■□□□□ 0.14
Alms1Q8K4E0 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Alms1Q8K4E0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Alms1Q8K4E0 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Alms1Q8K4E0 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Alms1Q8K4E0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Alms1Q8K4E0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Alms1Q8K4E0 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Alms1Q8K4E0 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Alms1Q8K4E0 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Alms1Q8K4E0 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.89■□□□□ 0.14
Alms1Q8K4E0 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Alms1Q8K4E0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Alms1Q8K4E0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Alms1Q8K4E0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Alms1Q8K4E0 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Alms1Q8K4E0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Alms1Q8K4E0 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.89■□□□□ 0.13
Alms1Q8K4E0 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Alms1Q8K4E0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.89■□□□□ 0.13
Alms1Q8K4E0 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.89■□□□□ 0.13
Alms1Q8K4E0 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Alms1Q8K4E0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Alms1Q8K4E0 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Alms1Q8K4E0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Alms1Q8K4E0 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Alms1Q8K4E0 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Alms1Q8K4E0 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Alms1Q8K4E0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Alms1Q8K4E0 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Alms1Q8K4E0 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Alms1Q8K4E0 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.89■□□□□ 0.13
Alms1Q8K4E0 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.89■□□□□ 0.13
Alms1Q8K4E0 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Alms1Q8K4E0 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Alms1Q8K4E0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Alms1Q8K4E0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Alms1Q8K4E0 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Alms1Q8K4E0 Gm26308-201ENSMUST00000157768 69 ntBASIC15.88■□□□□ 0.13
Alms1Q8K4E0 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Alms1Q8K4E0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Alms1Q8K4E0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Alms1Q8K4E0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Alms1Q8K4E0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Alms1Q8K4E0 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Alms1Q8K4E0 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Alms1Q8K4E0 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
Alms1Q8K4E0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Alms1Q8K4E0 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Alms1Q8K4E0 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Alms1Q8K4E0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Alms1Q8K4E0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Alms1Q8K4E0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Alms1Q8K4E0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Alms1Q8K4E0 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Alms1Q8K4E0 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Alms1Q8K4E0 AV026068-213ENSMUST00000223675 1171 ntBASIC15.88■□□□□ 0.13
Alms1Q8K4E0 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.88■□□□□ 0.13
Alms1Q8K4E0 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Alms1Q8K4E0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Alms1Q8K4E0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Alms1Q8K4E0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Alms1Q8K4E0 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Alms1Q8K4E0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Alms1Q8K4E0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Alms1Q8K4E0 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Alms1Q8K4E0 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Alms1Q8K4E0 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Alms1Q8K4E0 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Alms1Q8K4E0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.87■□□□□ 0.13
Alms1Q8K4E0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Alms1Q8K4E0 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.87■□□□□ 0.13
Alms1Q8K4E0 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.87■□□□□ 0.13
Alms1Q8K4E0 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Alms1Q8K4E0 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Alms1Q8K4E0 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.86■□□□□ 0.13
Alms1Q8K4E0 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Alms1Q8K4E0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Alms1Q8K4E0 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Alms1Q8K4E0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Alms1Q8K4E0 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Alms1Q8K4E0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Alms1Q8K4E0 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Alms1Q8K4E0 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Alms1Q8K4E0 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.86■□□□□ 0.13
Alms1Q8K4E0 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Alms1Q8K4E0 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Alms1Q8K4E0 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Alms1Q8K4E0 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Alms1Q8K4E0 Gm27397-201ENSMUST00000184997 107 ntBASIC15.86■□□□□ 0.13
Alms1Q8K4E0 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms