Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn4rl1Q8K0S5 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Rtn4rl1Q8K0S5 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.4■□□□□ 0.22
Rtn4rl1Q8K0S5 Mir8117-201ENSMUST00000184773 107 ntBASIC16.4■□□□□ 0.22
Rtn4rl1Q8K0S5 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.4■□□□□ 0.22
Rtn4rl1Q8K0S5 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn4rl1Q8K0S5 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.4■□□□□ 0.22
Rtn4rl1Q8K0S5 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.4■□□□□ 0.22
Rtn4rl1Q8K0S5 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn4rl1Q8K0S5 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn4rl1Q8K0S5 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn4rl1Q8K0S5 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn4rl1Q8K0S5 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Rtn4rl1Q8K0S5 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rtn4rl1Q8K0S5 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn4rl1Q8K0S5 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rtn4rl1Q8K0S5 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.39■□□□□ 0.21
Rtn4rl1Q8K0S5 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.39■□□□□ 0.21
Rtn4rl1Q8K0S5 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn4rl1Q8K0S5 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rtn4rl1Q8K0S5 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.39■□□□□ 0.21
Rtn4rl1Q8K0S5 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Rtn4rl1Q8K0S5 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.39■□□□□ 0.21
Rtn4rl1Q8K0S5 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.39■□□□□ 0.21
Rtn4rl1Q8K0S5 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.39■□□□□ 0.21
Rtn4rl1Q8K0S5 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn4rl1Q8K0S5 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.39■□□□□ 0.21
Rtn4rl1Q8K0S5 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn4rl1Q8K0S5 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn4rl1Q8K0S5 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn4rl1Q8K0S5 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn4rl1Q8K0S5 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn4rl1Q8K0S5 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn4rl1Q8K0S5 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn4rl1Q8K0S5 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Rtn4rl1Q8K0S5 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn4rl1Q8K0S5 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn4rl1Q8K0S5 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn4rl1Q8K0S5 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Rtn4rl1Q8K0S5 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn4rl1Q8K0S5 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn4rl1Q8K0S5 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn4rl1Q8K0S5 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Rtn4rl1Q8K0S5 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn4rl1Q8K0S5 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn4rl1Q8K0S5 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn4rl1Q8K0S5 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.38■□□□□ 0.21
Rtn4rl1Q8K0S5 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn4rl1Q8K0S5 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn4rl1Q8K0S5 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn4rl1Q8K0S5 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.38■□□□□ 0.21
Rtn4rl1Q8K0S5 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Rtn4rl1Q8K0S5 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn4rl1Q8K0S5 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.38■□□□□ 0.21
Rtn4rl1Q8K0S5 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn4rl1Q8K0S5 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn4rl1Q8K0S5 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.38■□□□□ 0.21
Rtn4rl1Q8K0S5 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn4rl1Q8K0S5 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.38■□□□□ 0.21
Rtn4rl1Q8K0S5 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Rtn4rl1Q8K0S5 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4rl1Q8K0S5 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4rl1Q8K0S5 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4rl1Q8K0S5 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4rl1Q8K0S5 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4rl1Q8K0S5 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4rl1Q8K0S5 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4rl1Q8K0S5 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.37■□□□□ 0.21
Rtn4rl1Q8K0S5 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.37■□□□□ 0.21
Rtn4rl1Q8K0S5 Gm26308-201ENSMUST00000157768 69 ntBASIC16.37■□□□□ 0.21
Rtn4rl1Q8K0S5 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4rl1Q8K0S5 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Rtn4rl1Q8K0S5 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.37■□□□□ 0.21
Rtn4rl1Q8K0S5 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.37■□□□□ 0.21
Rtn4rl1Q8K0S5 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Rtn4rl1Q8K0S5 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.37■□□□□ 0.21
Rtn4rl1Q8K0S5 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4rl1Q8K0S5 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4rl1Q8K0S5 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4rl1Q8K0S5 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4rl1Q8K0S5 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4rl1Q8K0S5 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4rl1Q8K0S5 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4rl1Q8K0S5 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4rl1Q8K0S5 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4rl1Q8K0S5 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn4rl1Q8K0S5 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn4rl1Q8K0S5 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn4rl1Q8K0S5 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.36■□□□□ 0.21
Rtn4rl1Q8K0S5 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn4rl1Q8K0S5 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn4rl1Q8K0S5 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn4rl1Q8K0S5 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn4rl1Q8K0S5 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn4rl1Q8K0S5 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn4rl1Q8K0S5 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn4rl1Q8K0S5 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn4rl1Q8K0S5 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.36■□□□□ 0.21
Rtn4rl1Q8K0S5 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn4rl1Q8K0S5 Gm45167-201ENSMUST00000208007 322 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms