Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Gm9172-201ENSMUST00000212092 954 ntBASIC18.3■□□□□ 0.52
Depdc1aQ8CIG0 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Depdc1aQ8CIG0 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Depdc1aQ8CIG0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Depdc1aQ8CIG0 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Depdc1aQ8CIG0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Depdc1aQ8CIG0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Depdc1aQ8CIG0 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Depdc1aQ8CIG0 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Depdc1aQ8CIG0 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Depdc1aQ8CIG0 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Depdc1aQ8CIG0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Depdc1aQ8CIG0 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Depdc1aQ8CIG0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Depdc1aQ8CIG0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Depdc1aQ8CIG0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Depdc1aQ8CIG0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Depdc1aQ8CIG0 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Depdc1aQ8CIG0 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Depdc1aQ8CIG0 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Depdc1aQ8CIG0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Depdc1aQ8CIG0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Depdc1aQ8CIG0 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Depdc1aQ8CIG0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Depdc1aQ8CIG0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Depdc1aQ8CIG0 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Depdc1aQ8CIG0 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Depdc1aQ8CIG0 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.28■□□□□ 0.52
Depdc1aQ8CIG0 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Depdc1aQ8CIG0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Depdc1aQ8CIG0 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Depdc1aQ8CIG0 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Depdc1aQ8CIG0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Depdc1aQ8CIG0 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Depdc1aQ8CIG0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Depdc1aQ8CIG0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Depdc1aQ8CIG0 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.28■□□□□ 0.52
Depdc1aQ8CIG0 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.28■□□□□ 0.52
Depdc1aQ8CIG0 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.28■□□□□ 0.52
Depdc1aQ8CIG0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.28■□□□□ 0.52
Depdc1aQ8CIG0 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.28■□□□□ 0.52
Depdc1aQ8CIG0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Depdc1aQ8CIG0 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Depdc1aQ8CIG0 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Depdc1aQ8CIG0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Depdc1aQ8CIG0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Depdc1aQ8CIG0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.28■□□□□ 0.52
Depdc1aQ8CIG0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Depdc1aQ8CIG0 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Depdc1aQ8CIG0 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.28■□□□□ 0.52
Depdc1aQ8CIG0 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Depdc1aQ8CIG0 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Depdc1aQ8CIG0 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Depdc1aQ8CIG0 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Depdc1aQ8CIG0 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Depdc1aQ8CIG0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.27■□□□□ 0.52
Depdc1aQ8CIG0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Depdc1aQ8CIG0 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
Depdc1aQ8CIG0 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Depdc1aQ8CIG0 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.27■□□□□ 0.52
Depdc1aQ8CIG0 Gm18195-201ENSMUST00000207604 706 ntBASIC18.27■□□□□ 0.52
Depdc1aQ8CIG0 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Depdc1aQ8CIG0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
Depdc1aQ8CIG0 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Depdc1aQ8CIG0 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Depdc1aQ8CIG0 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Depdc1aQ8CIG0 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.27■□□□□ 0.51
Depdc1aQ8CIG0 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Depdc1aQ8CIG0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
Depdc1aQ8CIG0 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Depdc1aQ8CIG0 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Depdc1aQ8CIG0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Depdc1aQ8CIG0 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Depdc1aQ8CIG0 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Depdc1aQ8CIG0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Depdc1aQ8CIG0 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Depdc1aQ8CIG0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Depdc1aQ8CIG0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Depdc1aQ8CIG0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Depdc1aQ8CIG0 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Depdc1aQ8CIG0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Depdc1aQ8CIG0 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Depdc1aQ8CIG0 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.26■□□□□ 0.51
Depdc1aQ8CIG0 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Depdc1aQ8CIG0 Gm8097-201ENSMUST00000117903 829 ntBASIC18.26■□□□□ 0.51
Depdc1aQ8CIG0 Gm13418-201ENSMUST00000119097 944 ntBASIC18.26■□□□□ 0.51
Depdc1aQ8CIG0 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Depdc1aQ8CIG0 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Depdc1aQ8CIG0 Gm4535-201ENSMUST00000182274 558 ntBASIC18.26■□□□□ 0.51
Depdc1aQ8CIG0 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.26■□□□□ 0.51
Depdc1aQ8CIG0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Depdc1aQ8CIG0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Depdc1aQ8CIG0 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Depdc1aQ8CIG0 Gm10355-201ENSMUST00000097146 517 ntBASIC18.26■□□□□ 0.51
Depdc1aQ8CIG0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Depdc1aQ8CIG0 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Depdc1aQ8CIG0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Depdc1aQ8CIG0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Depdc1aQ8CIG0 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Depdc1aQ8CIG0 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms