Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf31Q8CCF0 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.79■□□□□ 0.44
Prpf31Q8CCF0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf31Q8CCF0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.79■□□□□ 0.44
Prpf31Q8CCF0 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf31Q8CCF0 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf31Q8CCF0 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Prpf31Q8CCF0 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf31Q8CCF0 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prpf31Q8CCF0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Prpf31Q8CCF0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf31Q8CCF0 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf31Q8CCF0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf31Q8CCF0 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf31Q8CCF0 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf31Q8CCF0 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf31Q8CCF0 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf31Q8CCF0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf31Q8CCF0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf31Q8CCF0 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf31Q8CCF0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.78■□□□□ 0.44
Prpf31Q8CCF0 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.78■□□□□ 0.44
Prpf31Q8CCF0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.78■□□□□ 0.44
Prpf31Q8CCF0 Gm43347-201ENSMUST00000200226 580 ntBASIC17.78■□□□□ 0.44
Prpf31Q8CCF0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.78■□□□□ 0.44
Prpf31Q8CCF0 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.78■□□□□ 0.44
Prpf31Q8CCF0 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.78■□□□□ 0.44
Prpf31Q8CCF0 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.78■□□□□ 0.44
Prpf31Q8CCF0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf31Q8CCF0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf31Q8CCF0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf31Q8CCF0 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf31Q8CCF0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.78■□□□□ 0.44
Prpf31Q8CCF0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Prpf31Q8CCF0 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf31Q8CCF0 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf31Q8CCF0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prpf31Q8CCF0 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Prpf31Q8CCF0 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf31Q8CCF0 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf31Q8CCF0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf31Q8CCF0 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf31Q8CCF0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf31Q8CCF0 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf31Q8CCF0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.77■□□□□ 0.44
Prpf31Q8CCF0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.77■□□□□ 0.44
Prpf31Q8CCF0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.77■□□□□ 0.44
Prpf31Q8CCF0 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Prpf31Q8CCF0 Gm27867-201ENSMUST00000184778 125 ntBASIC17.77■□□□□ 0.44
Prpf31Q8CCF0 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prpf31Q8CCF0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Prpf31Q8CCF0 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Prpf31Q8CCF0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Prpf31Q8CCF0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Prpf31Q8CCF0 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Prpf31Q8CCF0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf31Q8CCF0 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Prpf31Q8CCF0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf31Q8CCF0 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf31Q8CCF0 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf31Q8CCF0 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.76■□□□□ 0.43
Prpf31Q8CCF0 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Prpf31Q8CCF0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf31Q8CCF0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf31Q8CCF0 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.76■□□□□ 0.43
Prpf31Q8CCF0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.76■□□□□ 0.43
Prpf31Q8CCF0 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf31Q8CCF0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.76■□□□□ 0.43
Prpf31Q8CCF0 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf31Q8CCF0 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf31Q8CCF0 Gm7461-201ENSMUST00000058918 827 ntBASIC17.76■□□□□ 0.43
Prpf31Q8CCF0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf31Q8CCF0 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf31Q8CCF0 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf31Q8CCF0 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf31Q8CCF0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Prpf31Q8CCF0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf31Q8CCF0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf31Q8CCF0 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf31Q8CCF0 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf31Q8CCF0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf31Q8CCF0 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf31Q8CCF0 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf31Q8CCF0 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf31Q8CCF0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf31Q8CCF0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf31Q8CCF0 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf31Q8CCF0 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf31Q8CCF0 Gm15165-201ENSMUST00000118140 502 ntBASIC17.75■□□□□ 0.43
Prpf31Q8CCF0 Gm12644-201ENSMUST00000119935 606 ntBASIC17.75■□□□□ 0.43
Prpf31Q8CCF0 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf31Q8CCF0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Prpf31Q8CCF0 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf31Q8CCF0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.75■□□□□ 0.43
Prpf31Q8CCF0 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf31Q8CCF0 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf31Q8CCF0 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Prpf31Q8CCF0 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf31Q8CCF0 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Prpf31Q8CCF0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms