Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps53Q8CCB4 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vps53Q8CCB4 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vps53Q8CCB4 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.93■□□□□ 0.62
Vps53Q8CCB4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps53Q8CCB4 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps53Q8CCB4 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps53Q8CCB4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Vps53Q8CCB4 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Vps53Q8CCB4 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Vps53Q8CCB4 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.93■□□□□ 0.62
Vps53Q8CCB4 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.93■□□□□ 0.62
Vps53Q8CCB4 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Vps53Q8CCB4 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.93■□□□□ 0.62
Vps53Q8CCB4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Vps53Q8CCB4 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Vps53Q8CCB4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps53Q8CCB4 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Vps53Q8CCB4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps53Q8CCB4 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps53Q8CCB4 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps53Q8CCB4 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Vps53Q8CCB4 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps53Q8CCB4 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps53Q8CCB4 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.92■□□□□ 0.62
Vps53Q8CCB4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Vps53Q8CCB4 Actl10-202ENSMUST00000226583 1501 ntBASIC18.92■□□□□ 0.62
Vps53Q8CCB4 Mir770-201ENSMUST00000103252 94 ntBASIC18.92■□□□□ 0.62
Vps53Q8CCB4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Vps53Q8CCB4 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Vps53Q8CCB4 Gm37722-201ENSMUST00000193757 208 ntBASIC18.92■□□□□ 0.62
Vps53Q8CCB4 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps53Q8CCB4 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps53Q8CCB4 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps53Q8CCB4 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps53Q8CCB4 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps53Q8CCB4 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps53Q8CCB4 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps53Q8CCB4 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps53Q8CCB4 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps53Q8CCB4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps53Q8CCB4 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps53Q8CCB4 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps53Q8CCB4 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps53Q8CCB4 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps53Q8CCB4 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps53Q8CCB4 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps53Q8CCB4 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps53Q8CCB4 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps53Q8CCB4 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps53Q8CCB4 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps53Q8CCB4 Gm18115-201ENSMUST00000221209 621 ntBASIC18.91■□□□□ 0.62
Vps53Q8CCB4 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps53Q8CCB4 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Vps53Q8CCB4 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Vps53Q8CCB4 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
Vps53Q8CCB4 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps53Q8CCB4 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vps53Q8CCB4 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps53Q8CCB4 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps53Q8CCB4 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps53Q8CCB4 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps53Q8CCB4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Vps53Q8CCB4 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Vps53Q8CCB4 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Vps53Q8CCB4 Gm24589-201ENSMUST00000116692 94 ntBASIC18.9■□□□□ 0.62
Vps53Q8CCB4 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Vps53Q8CCB4 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Vps53Q8CCB4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps53Q8CCB4 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps53Q8CCB4 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps53Q8CCB4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps53Q8CCB4 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps53Q8CCB4 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps53Q8CCB4 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps53Q8CCB4 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps53Q8CCB4 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps53Q8CCB4 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps53Q8CCB4 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps53Q8CCB4 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps53Q8CCB4 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps53Q8CCB4 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vps53Q8CCB4 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
Vps53Q8CCB4 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Vps53Q8CCB4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Vps53Q8CCB4 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Vps53Q8CCB4 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Vps53Q8CCB4 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps53Q8CCB4 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.89■□□□□ 0.61
Vps53Q8CCB4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Vps53Q8CCB4 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps53Q8CCB4 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Vps53Q8CCB4 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.89■□□□□ 0.61
Vps53Q8CCB4 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.89■□□□□ 0.61
Vps53Q8CCB4 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.89■□□□□ 0.61
Vps53Q8CCB4 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.89■□□□□ 0.61
Vps53Q8CCB4 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps53Q8CCB4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps53Q8CCB4 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vps53Q8CCB4 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms