Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Aph1bQ8C7N7 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Aph1bQ8C7N7 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Aph1bQ8C7N7 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.14■□□□□ 0.17
Aph1bQ8C7N7 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Aph1bQ8C7N7 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Aph1bQ8C7N7 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Aph1bQ8C7N7 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Aph1bQ8C7N7 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Aph1bQ8C7N7 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Aph1bQ8C7N7 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.14■□□□□ 0.17
Aph1bQ8C7N7 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Aph1bQ8C7N7 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Aph1bQ8C7N7 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Aph1bQ8C7N7 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Aph1bQ8C7N7 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Aph1bQ8C7N7 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Aph1bQ8C7N7 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Aph1bQ8C7N7 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Aph1bQ8C7N7 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Aph1bQ8C7N7 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Aph1bQ8C7N7 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Aph1bQ8C7N7 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Aph1bQ8C7N7 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Aph1bQ8C7N7 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Aph1bQ8C7N7 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Aph1bQ8C7N7 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Aph1bQ8C7N7 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.13■□□□□ 0.17
Aph1bQ8C7N7 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Aph1bQ8C7N7 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Aph1bQ8C7N7 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Aph1bQ8C7N7 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.12■□□□□ 0.17
Aph1bQ8C7N7 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.12■□□□□ 0.17
Aph1bQ8C7N7 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Aph1bQ8C7N7 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Aph1bQ8C7N7 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Aph1bQ8C7N7 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Aph1bQ8C7N7 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Aph1bQ8C7N7 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Aph1bQ8C7N7 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Aph1bQ8C7N7 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.12■□□□□ 0.17
Aph1bQ8C7N7 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Aph1bQ8C7N7 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Aph1bQ8C7N7 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.12■□□□□ 0.17
Aph1bQ8C7N7 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Aph1bQ8C7N7 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Aph1bQ8C7N7 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.12■□□□□ 0.17
Aph1bQ8C7N7 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Aph1bQ8C7N7 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Aph1bQ8C7N7 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Aph1bQ8C7N7 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Aph1bQ8C7N7 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Aph1bQ8C7N7 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Aph1bQ8C7N7 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Aph1bQ8C7N7 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.12■□□□□ 0.17
Aph1bQ8C7N7 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Aph1bQ8C7N7 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Aph1bQ8C7N7 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Aph1bQ8C7N7 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Aph1bQ8C7N7 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Aph1bQ8C7N7 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Aph1bQ8C7N7 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.12■□□□□ 0.17
Aph1bQ8C7N7 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Aph1bQ8C7N7 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Aph1bQ8C7N7 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Aph1bQ8C7N7 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Aph1bQ8C7N7 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Aph1bQ8C7N7 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Aph1bQ8C7N7 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Aph1bQ8C7N7 App-207ENSMUST00000227737 2827 ntBASIC16.11■□□□□ 0.17
Aph1bQ8C7N7 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Aph1bQ8C7N7 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Aph1bQ8C7N7 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Aph1bQ8C7N7 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Aph1bQ8C7N7 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Aph1bQ8C7N7 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.11■□□□□ 0.17
Aph1bQ8C7N7 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Aph1bQ8C7N7 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Aph1bQ8C7N7 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.11■□□□□ 0.17
Aph1bQ8C7N7 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Aph1bQ8C7N7 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Aph1bQ8C7N7 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Aph1bQ8C7N7 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Aph1bQ8C7N7 Mir1668-201ENSMUST00000184114 107 ntBASIC16.11■□□□□ 0.17
Aph1bQ8C7N7 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.11■□□□□ 0.17
Aph1bQ8C7N7 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.11■□□□□ 0.17
Aph1bQ8C7N7 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Aph1bQ8C7N7 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.11■□□□□ 0.17
Aph1bQ8C7N7 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
Aph1bQ8C7N7 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Aph1bQ8C7N7 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Aph1bQ8C7N7 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Aph1bQ8C7N7 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Aph1bQ8C7N7 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Aph1bQ8C7N7 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Aph1bQ8C7N7 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Aph1bQ8C7N7 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Aph1bQ8C7N7 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Aph1bQ8C7N7 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Aph1bQ8C7N7 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms