Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap54Q8C6S9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap54Q8C6S9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap54Q8C6S9 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap54Q8C6S9 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap54Q8C6S9 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap54Q8C6S9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.54■□□□□ 0.08
Cfap54Q8C6S9 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap54Q8C6S9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap54Q8C6S9 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap54Q8C6S9 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap54Q8C6S9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap54Q8C6S9 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap54Q8C6S9 Gm44492-201ENSMUST00000197012 141 ntBASIC15.54■□□□□ 0.08
Cfap54Q8C6S9 CT025535.1-201ENSMUST00000227172 491 ntBASIC15.54■□□□□ 0.08
Cfap54Q8C6S9 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap54Q8C6S9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cfap54Q8C6S9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cfap54Q8C6S9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Cfap54Q8C6S9 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Cfap54Q8C6S9 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cfap54Q8C6S9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cfap54Q8C6S9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cfap54Q8C6S9 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cfap54Q8C6S9 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Cfap54Q8C6S9 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cfap54Q8C6S9 Gm5312-201ENSMUST00000203728 547 ntBASIC15.53■□□□□ 0.08
Cfap54Q8C6S9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cfap54Q8C6S9 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.53■□□□□ 0.08
Cfap54Q8C6S9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Cfap54Q8C6S9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cfap54Q8C6S9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cfap54Q8C6S9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.53■□□□□ 0.08
Cfap54Q8C6S9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cfap54Q8C6S9 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cfap54Q8C6S9 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cfap54Q8C6S9 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Cfap54Q8C6S9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.52■□□□□ 0.08
Cfap54Q8C6S9 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cfap54Q8C6S9 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Cfap54Q8C6S9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cfap54Q8C6S9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cfap54Q8C6S9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cfap54Q8C6S9 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.52■□□□□ 0.08
Cfap54Q8C6S9 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.52■□□□□ 0.08
Cfap54Q8C6S9 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.52■□□□□ 0.08
Cfap54Q8C6S9 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.52■□□□□ 0.08
Cfap54Q8C6S9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Cfap54Q8C6S9 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cfap54Q8C6S9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cfap54Q8C6S9 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cfap54Q8C6S9 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.52■□□□□ 0.07
Cfap54Q8C6S9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cfap54Q8C6S9 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cfap54Q8C6S9 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.52■□□□□ 0.07
Cfap54Q8C6S9 Gm7222-201ENSMUST00000117512 906 ntBASIC15.52■□□□□ 0.07
Cfap54Q8C6S9 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.52■□□□□ 0.07
Cfap54Q8C6S9 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cfap54Q8C6S9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
Cfap54Q8C6S9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cfap54Q8C6S9 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cfap54Q8C6S9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Cfap54Q8C6S9 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cfap54Q8C6S9 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cfap54Q8C6S9 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cfap54Q8C6S9 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Cfap54Q8C6S9 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cfap54Q8C6S9 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cfap54Q8C6S9 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cfap54Q8C6S9 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cfap54Q8C6S9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Cfap54Q8C6S9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cfap54Q8C6S9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cfap54Q8C6S9 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cfap54Q8C6S9 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cfap54Q8C6S9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cfap54Q8C6S9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cfap54Q8C6S9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cfap54Q8C6S9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cfap54Q8C6S9 Gm44335-201ENSMUST00000196879 141 ntBASIC15.51■□□□□ 0.07
Cfap54Q8C6S9 Gm44297-201ENSMUST00000198304 141 ntBASIC15.51■□□□□ 0.07
Cfap54Q8C6S9 Gm44346-201ENSMUST00000198851 141 ntBASIC15.51■□□□□ 0.07
Cfap54Q8C6S9 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC15.51■□□□□ 0.07
Cfap54Q8C6S9 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cfap54Q8C6S9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cfap54Q8C6S9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.51■□□□□ 0.07
Cfap54Q8C6S9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cfap54Q8C6S9 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cfap54Q8C6S9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cfap54Q8C6S9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cfap54Q8C6S9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cfap54Q8C6S9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cfap54Q8C6S9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cfap54Q8C6S9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cfap54Q8C6S9 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cfap54Q8C6S9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cfap54Q8C6S9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cfap54Q8C6S9 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.5■□□□□ 0.07
Cfap54Q8C6S9 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.5■□□□□ 0.07
Cfap54Q8C6S9 Gm5745-201ENSMUST00000183748 313 ntBASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms