Protein–RNA interactions for Protein: Q8C5U0

4933409G03Rik, RIKEN cDNA 4933409G03 gene, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933409G03RikQ8C5U0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
4933409G03RikQ8C5U0 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
4933409G03RikQ8C5U0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
4933409G03RikQ8C5U0 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
4933409G03RikQ8C5U0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
4933409G03RikQ8C5U0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
4933409G03RikQ8C5U0 Mir5131-201ENSMUST00000175426 93 ntBASIC17.64■□□□□ 0.41
4933409G03RikQ8C5U0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
4933409G03RikQ8C5U0 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.64■□□□□ 0.41
4933409G03RikQ8C5U0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.64■□□□□ 0.41
4933409G03RikQ8C5U0 AW822252-206ENSMUST00000208904 237 ntBASIC17.64■□□□□ 0.41
4933409G03RikQ8C5U0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
4933409G03RikQ8C5U0 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
4933409G03RikQ8C5U0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
4933409G03RikQ8C5U0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
4933409G03RikQ8C5U0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
4933409G03RikQ8C5U0 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
4933409G03RikQ8C5U0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
4933409G03RikQ8C5U0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
4933409G03RikQ8C5U0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
4933409G03RikQ8C5U0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
4933409G03RikQ8C5U0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
4933409G03RikQ8C5U0 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.64■□□□□ 0.41
4933409G03RikQ8C5U0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
4933409G03RikQ8C5U0 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
4933409G03RikQ8C5U0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
4933409G03RikQ8C5U0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
4933409G03RikQ8C5U0 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
4933409G03RikQ8C5U0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
4933409G03RikQ8C5U0 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
4933409G03RikQ8C5U0 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
4933409G03RikQ8C5U0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.63■□□□□ 0.41
4933409G03RikQ8C5U0 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.63■□□□□ 0.41
4933409G03RikQ8C5U0 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
4933409G03RikQ8C5U0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
4933409G03RikQ8C5U0 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.63■□□□□ 0.41
4933409G03RikQ8C5U0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
4933409G03RikQ8C5U0 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
4933409G03RikQ8C5U0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
4933409G03RikQ8C5U0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
4933409G03RikQ8C5U0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
4933409G03RikQ8C5U0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
4933409G03RikQ8C5U0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
4933409G03RikQ8C5U0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
4933409G03RikQ8C5U0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
4933409G03RikQ8C5U0 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.62■□□□□ 0.41
4933409G03RikQ8C5U0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
4933409G03RikQ8C5U0 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.62■□□□□ 0.41
4933409G03RikQ8C5U0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.62■□□□□ 0.41
4933409G03RikQ8C5U0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.62■□□□□ 0.41
4933409G03RikQ8C5U0 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
4933409G03RikQ8C5U0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.62■□□□□ 0.41
4933409G03RikQ8C5U0 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
4933409G03RikQ8C5U0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
4933409G03RikQ8C5U0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
4933409G03RikQ8C5U0 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
4933409G03RikQ8C5U0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
4933409G03RikQ8C5U0 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
4933409G03RikQ8C5U0 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
4933409G03RikQ8C5U0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
4933409G03RikQ8C5U0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
4933409G03RikQ8C5U0 Gm8655-201ENSMUST00000221159 852 ntBASIC17.61■□□□□ 0.41
4933409G03RikQ8C5U0 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
4933409G03RikQ8C5U0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
4933409G03RikQ8C5U0 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
4933409G03RikQ8C5U0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
4933409G03RikQ8C5U0 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
4933409G03RikQ8C5U0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
4933409G03RikQ8C5U0 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
4933409G03RikQ8C5U0 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
4933409G03RikQ8C5U0 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
4933409G03RikQ8C5U0 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
4933409G03RikQ8C5U0 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
4933409G03RikQ8C5U0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
4933409G03RikQ8C5U0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
4933409G03RikQ8C5U0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
4933409G03RikQ8C5U0 Gm25990-201ENSMUST00000102440 86 ntBASIC17.6■□□□□ 0.41
4933409G03RikQ8C5U0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
4933409G03RikQ8C5U0 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.6■□□□□ 0.41
4933409G03RikQ8C5U0 Gm25406-201ENSMUST00000157599 105 ntBASIC17.6■□□□□ 0.41
4933409G03RikQ8C5U0 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
4933409G03RikQ8C5U0 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.6■□□□□ 0.41
4933409G03RikQ8C5U0 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
4933409G03RikQ8C5U0 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.6■□□□□ 0.41
4933409G03RikQ8C5U0 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
4933409G03RikQ8C5U0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
4933409G03RikQ8C5U0 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
4933409G03RikQ8C5U0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
4933409G03RikQ8C5U0 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
4933409G03RikQ8C5U0 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
4933409G03RikQ8C5U0 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
4933409G03RikQ8C5U0 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
4933409G03RikQ8C5U0 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
4933409G03RikQ8C5U0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
4933409G03RikQ8C5U0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
4933409G03RikQ8C5U0 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
4933409G03RikQ8C5U0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
4933409G03RikQ8C5U0 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
4933409G03RikQ8C5U0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
4933409G03RikQ8C5U0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms