Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ska3Q8C263 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ska3Q8C263 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ska3Q8C263 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ska3Q8C263 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ska3Q8C263 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ska3Q8C263 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ska3Q8C263 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Ska3Q8C263 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ska3Q8C263 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Ska3Q8C263 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ska3Q8C263 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ska3Q8C263 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ska3Q8C263 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ska3Q8C263 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ska3Q8C263 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ska3Q8C263 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ska3Q8C263 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ska3Q8C263 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Ska3Q8C263 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ska3Q8C263 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ska3Q8C263 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ska3Q8C263 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Ska3Q8C263 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.32■□□□□ 0.04
Ska3Q8C263 Gm45328-201ENSMUST00000210942 917 ntBASIC15.32■□□□□ 0.04
Ska3Q8C263 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ska3Q8C263 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Ska3Q8C263 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.32■□□□□ 0.04
Ska3Q8C263 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ska3Q8C263 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ska3Q8C263 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ska3Q8C263 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ska3Q8C263 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Ska3Q8C263 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ska3Q8C263 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.31■□□□□ 0.04
Ska3Q8C263 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ska3Q8C263 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ska3Q8C263 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ska3Q8C263 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ska3Q8C263 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ska3Q8C263 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ska3Q8C263 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ska3Q8C263 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ska3Q8C263 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ska3Q8C263 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.31■□□□□ 0.04
Ska3Q8C263 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ska3Q8C263 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ska3Q8C263 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ska3Q8C263 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ska3Q8C263 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ska3Q8C263 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ska3Q8C263 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ska3Q8C263 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ska3Q8C263 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ska3Q8C263 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ska3Q8C263 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ska3Q8C263 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Ska3Q8C263 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ska3Q8C263 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ska3Q8C263 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ska3Q8C263 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ska3Q8C263 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ska3Q8C263 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ska3Q8C263 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ska3Q8C263 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ska3Q8C263 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ska3Q8C263 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ska3Q8C263 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ska3Q8C263 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ska3Q8C263 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ska3Q8C263 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Ska3Q8C263 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Ska3Q8C263 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ska3Q8C263 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ska3Q8C263 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ska3Q8C263 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.3■□□□□ 0.04
Ska3Q8C263 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ska3Q8C263 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ska3Q8C263 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ska3Q8C263 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ska3Q8C263 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ska3Q8C263 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.3■□□□□ 0.04
Ska3Q8C263 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ska3Q8C263 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ska3Q8C263 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.3■□□□□ 0.04
Ska3Q8C263 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ska3Q8C263 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ska3Q8C263 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ska3Q8C263 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ska3Q8C263 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.29■□□□□ 0.04
Ska3Q8C263 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.29■□□□□ 0.04
Ska3Q8C263 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ska3Q8C263 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ska3Q8C263 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ska3Q8C263 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ska3Q8C263 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.29■□□□□ 0.04
Ska3Q8C263 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ska3Q8C263 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ska3Q8C263 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ska3Q8C263 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms