Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps9d1Q8C190 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps9d1Q8C190 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Vps9d1Q8C190 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps9d1Q8C190 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps9d1Q8C190 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps9d1Q8C190 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps9d1Q8C190 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps9d1Q8C190 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps9d1Q8C190 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Vps9d1Q8C190 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps9d1Q8C190 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps9d1Q8C190 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.29■□□□□ 0.04
Vps9d1Q8C190 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.29■□□□□ 0.04
Vps9d1Q8C190 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps9d1Q8C190 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Vps9d1Q8C190 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps9d1Q8C190 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps9d1Q8C190 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps9d1Q8C190 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Vps9d1Q8C190 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps9d1Q8C190 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps9d1Q8C190 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps9d1Q8C190 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps9d1Q8C190 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Vps9d1Q8C190 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Vps9d1Q8C190 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps9d1Q8C190 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps9d1Q8C190 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Vps9d1Q8C190 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Vps9d1Q8C190 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Vps9d1Q8C190 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps9d1Q8C190 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps9d1Q8C190 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Vps9d1Q8C190 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Vps9d1Q8C190 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.28■□□□□ 0.04
Vps9d1Q8C190 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps9d1Q8C190 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.28■□□□□ 0.04
Vps9d1Q8C190 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.28■□□□□ 0.04
Vps9d1Q8C190 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.28■□□□□ 0.04
Vps9d1Q8C190 Odf3b-204ENSMUST00000227834 930 ntBASIC15.28■□□□□ 0.04
Vps9d1Q8C190 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps9d1Q8C190 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps9d1Q8C190 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps9d1Q8C190 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps9d1Q8C190 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps9d1Q8C190 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vps9d1Q8C190 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps9d1Q8C190 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps9d1Q8C190 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.27■□□□□ 0.04
Vps9d1Q8C190 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps9d1Q8C190 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps9d1Q8C190 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vps9d1Q8C190 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps9d1Q8C190 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Vps9d1Q8C190 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Vps9d1Q8C190 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Vps9d1Q8C190 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vps9d1Q8C190 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps9d1Q8C190 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps9d1Q8C190 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Vps9d1Q8C190 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vps9d1Q8C190 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Vps9d1Q8C190 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Vps9d1Q8C190 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Vps9d1Q8C190 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.27■□□□□ 0.04
Vps9d1Q8C190 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps9d1Q8C190 Gm5417-201ENSMUST00000079706 384 ntBASIC15.27■□□□□ 0.04
Vps9d1Q8C190 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vps9d1Q8C190 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Vps9d1Q8C190 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps9d1Q8C190 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Vps9d1Q8C190 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.27■□□□□ 0.03
Vps9d1Q8C190 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.27■□□□□ 0.03
Vps9d1Q8C190 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps9d1Q8C190 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps9d1Q8C190 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Vps9d1Q8C190 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps9d1Q8C190 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Vps9d1Q8C190 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.26■□□□□ 0.03
Vps9d1Q8C190 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps9d1Q8C190 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps9d1Q8C190 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps9d1Q8C190 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps9d1Q8C190 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
Vps9d1Q8C190 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.26■□□□□ 0.03
Vps9d1Q8C190 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Vps9d1Q8C190 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps9d1Q8C190 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps9d1Q8C190 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps9d1Q8C190 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps9d1Q8C190 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Vps9d1Q8C190 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps9d1Q8C190 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.26■□□□□ 0.03
Vps9d1Q8C190 Gm38027-201ENSMUST00000192315 235 ntBASIC15.26■□□□□ 0.03
Vps9d1Q8C190 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.26■□□□□ 0.03
Vps9d1Q8C190 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps9d1Q8C190 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.26■□□□□ 0.03
Vps9d1Q8C190 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps9d1Q8C190 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms