Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trub1Q8C0D0 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trub1Q8C0D0 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trub1Q8C0D0 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trub1Q8C0D0 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trub1Q8C0D0 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trub1Q8C0D0 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trub1Q8C0D0 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trub1Q8C0D0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trub1Q8C0D0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trub1Q8C0D0 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trub1Q8C0D0 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trub1Q8C0D0 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trub1Q8C0D0 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trub1Q8C0D0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Trub1Q8C0D0 Gm9013-201ENSMUST00000132939 882 ntBASIC16.82■□□□□ 0.28
Trub1Q8C0D0 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.82■□□□□ 0.28
Trub1Q8C0D0 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trub1Q8C0D0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trub1Q8C0D0 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trub1Q8C0D0 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trub1Q8C0D0 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.82■□□□□ 0.28
Trub1Q8C0D0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trub1Q8C0D0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trub1Q8C0D0 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trub1Q8C0D0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trub1Q8C0D0 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trub1Q8C0D0 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trub1Q8C0D0 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trub1Q8C0D0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trub1Q8C0D0 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.81■□□□□ 0.28
Trub1Q8C0D0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trub1Q8C0D0 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trub1Q8C0D0 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trub1Q8C0D0 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trub1Q8C0D0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trub1Q8C0D0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trub1Q8C0D0 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Trub1Q8C0D0 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Trub1Q8C0D0 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Trub1Q8C0D0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.81■□□□□ 0.28
Trub1Q8C0D0 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trub1Q8C0D0 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trub1Q8C0D0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trub1Q8C0D0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trub1Q8C0D0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trub1Q8C0D0 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trub1Q8C0D0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trub1Q8C0D0 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trub1Q8C0D0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.81■□□□□ 0.28
Trub1Q8C0D0 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trub1Q8C0D0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trub1Q8C0D0 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trub1Q8C0D0 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trub1Q8C0D0 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trub1Q8C0D0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.8■□□□□ 0.28
Trub1Q8C0D0 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trub1Q8C0D0 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trub1Q8C0D0 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trub1Q8C0D0 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trub1Q8C0D0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trub1Q8C0D0 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trub1Q8C0D0 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.8■□□□□ 0.28
Trub1Q8C0D0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trub1Q8C0D0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trub1Q8C0D0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trub1Q8C0D0 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trub1Q8C0D0 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trub1Q8C0D0 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trub1Q8C0D0 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trub1Q8C0D0 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trub1Q8C0D0 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trub1Q8C0D0 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trub1Q8C0D0 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trub1Q8C0D0 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trub1Q8C0D0 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trub1Q8C0D0 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trub1Q8C0D0 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trub1Q8C0D0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.79■□□□□ 0.28
Trub1Q8C0D0 Gm5587-201ENSMUST00000206270 674 ntBASIC16.79■□□□□ 0.28
Trub1Q8C0D0 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trub1Q8C0D0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trub1Q8C0D0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.79■□□□□ 0.28
Trub1Q8C0D0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trub1Q8C0D0 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trub1Q8C0D0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trub1Q8C0D0 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.79■□□□□ 0.28
Trub1Q8C0D0 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trub1Q8C0D0 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trub1Q8C0D0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trub1Q8C0D0 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trub1Q8C0D0 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Trub1Q8C0D0 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trub1Q8C0D0 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trub1Q8C0D0 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trub1Q8C0D0 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trub1Q8C0D0 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trub1Q8C0D0 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trub1Q8C0D0 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trub1Q8C0D0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms