Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.4□□□□□ -0.1
SprnQ8BWU1 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SprnQ8BWU1 Il3ra-202ENSMUST00000223589 738 ntBASIC14.4□□□□□ -0.1
SprnQ8BWU1 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SprnQ8BWU1 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SprnQ8BWU1 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SprnQ8BWU1 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SprnQ8BWU1 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SprnQ8BWU1 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SprnQ8BWU1 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SprnQ8BWU1 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SprnQ8BWU1 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SprnQ8BWU1 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SprnQ8BWU1 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SprnQ8BWU1 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SprnQ8BWU1 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SprnQ8BWU1 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SprnQ8BWU1 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SprnQ8BWU1 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SprnQ8BWU1 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SprnQ8BWU1 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.39□□□□□ -0.11
SprnQ8BWU1 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SprnQ8BWU1 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SprnQ8BWU1 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SprnQ8BWU1 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SprnQ8BWU1 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.39□□□□□ -0.11
SprnQ8BWU1 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.39□□□□□ -0.11
SprnQ8BWU1 Mir5122-201ENSMUST00000175004 89 ntBASIC14.39□□□□□ -0.11
SprnQ8BWU1 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.39□□□□□ -0.11
SprnQ8BWU1 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SprnQ8BWU1 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SprnQ8BWU1 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SprnQ8BWU1 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SprnQ8BWU1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SprnQ8BWU1 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SprnQ8BWU1 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SprnQ8BWU1 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SprnQ8BWU1 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SprnQ8BWU1 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.39□□□□□ -0.11
SprnQ8BWU1 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SprnQ8BWU1 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SprnQ8BWU1 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SprnQ8BWU1 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SprnQ8BWU1 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SprnQ8BWU1 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SprnQ8BWU1 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SprnQ8BWU1 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.38□□□□□ -0.11
SprnQ8BWU1 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SprnQ8BWU1 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SprnQ8BWU1 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SprnQ8BWU1 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SprnQ8BWU1 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SprnQ8BWU1 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SprnQ8BWU1 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SprnQ8BWU1 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SprnQ8BWU1 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SprnQ8BWU1 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
SprnQ8BWU1 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.38□□□□□ -0.11
SprnQ8BWU1 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SprnQ8BWU1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SprnQ8BWU1 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SprnQ8BWU1 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SprnQ8BWU1 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SprnQ8BWU1 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SprnQ8BWU1 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SprnQ8BWU1 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SprnQ8BWU1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.38□□□□□ -0.11
SprnQ8BWU1 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SprnQ8BWU1 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SprnQ8BWU1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SprnQ8BWU1 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SprnQ8BWU1 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SprnQ8BWU1 Gm7977-201ENSMUST00000193787 748 ntBASIC14.38□□□□□ -0.11
SprnQ8BWU1 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SprnQ8BWU1 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SprnQ8BWU1 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SprnQ8BWU1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
SprnQ8BWU1 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SprnQ8BWU1 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.38□□□□□ -0.11
SprnQ8BWU1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SprnQ8BWU1 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SprnQ8BWU1 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SprnQ8BWU1 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SprnQ8BWU1 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SprnQ8BWU1 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SprnQ8BWU1 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SprnQ8BWU1 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SprnQ8BWU1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SprnQ8BWU1 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SprnQ8BWU1 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SprnQ8BWU1 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SprnQ8BWU1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SprnQ8BWU1 Actl10-202ENSMUST00000226583 1501 ntBASIC14.37□□□□□ -0.11
SprnQ8BWU1 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SprnQ8BWU1 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SprnQ8BWU1 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SprnQ8BWU1 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.37□□□□□ -0.11
SprnQ8BWU1 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SprnQ8BWU1 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SprnQ8BWU1 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms