Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Suds3Q8BR65 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Suds3Q8BR65 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Suds3Q8BR65 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Suds3Q8BR65 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Suds3Q8BR65 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Suds3Q8BR65 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Suds3Q8BR65 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Suds3Q8BR65 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Suds3Q8BR65 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Suds3Q8BR65 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.74■□□□□ 0.27
Suds3Q8BR65 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Suds3Q8BR65 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Suds3Q8BR65 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Suds3Q8BR65 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Suds3Q8BR65 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Suds3Q8BR65 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Suds3Q8BR65 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Suds3Q8BR65 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.74■□□□□ 0.27
Suds3Q8BR65 Gm18032-201ENSMUST00000222541 538 ntBASIC16.74■□□□□ 0.27
Suds3Q8BR65 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Suds3Q8BR65 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Suds3Q8BR65 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.74■□□□□ 0.27
Suds3Q8BR65 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Suds3Q8BR65 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Suds3Q8BR65 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Suds3Q8BR65 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.74■□□□□ 0.27
Suds3Q8BR65 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Suds3Q8BR65 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Suds3Q8BR65 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.74■□□□□ 0.27
Suds3Q8BR65 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Suds3Q8BR65 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Suds3Q8BR65 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Suds3Q8BR65 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Suds3Q8BR65 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Suds3Q8BR65 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Suds3Q8BR65 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Suds3Q8BR65 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Suds3Q8BR65 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Suds3Q8BR65 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Suds3Q8BR65 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Suds3Q8BR65 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Suds3Q8BR65 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Suds3Q8BR65 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Suds3Q8BR65 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Suds3Q8BR65 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Suds3Q8BR65 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Suds3Q8BR65 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Suds3Q8BR65 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Suds3Q8BR65 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Suds3Q8BR65 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.73■□□□□ 0.27
Suds3Q8BR65 Gm7213-201ENSMUST00000215977 950 ntBASIC16.73■□□□□ 0.27
Suds3Q8BR65 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Suds3Q8BR65 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Suds3Q8BR65 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Suds3Q8BR65 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Suds3Q8BR65 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.73■□□□□ 0.27
Suds3Q8BR65 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Suds3Q8BR65 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Suds3Q8BR65 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.73■□□□□ 0.27
Suds3Q8BR65 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.73■□□□□ 0.27
Suds3Q8BR65 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Suds3Q8BR65 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Suds3Q8BR65 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC16.72■□□□□ 0.27
Suds3Q8BR65 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Suds3Q8BR65 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Suds3Q8BR65 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Suds3Q8BR65 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.72■□□□□ 0.27
Suds3Q8BR65 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Suds3Q8BR65 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Suds3Q8BR65 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Suds3Q8BR65 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Suds3Q8BR65 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Suds3Q8BR65 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Suds3Q8BR65 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Suds3Q8BR65 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Suds3Q8BR65 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Suds3Q8BR65 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Suds3Q8BR65 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Suds3Q8BR65 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Suds3Q8BR65 Gm13474-201ENSMUST00000122466 815 ntBASIC16.72■□□□□ 0.27
Suds3Q8BR65 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.72■□□□□ 0.27
Suds3Q8BR65 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Suds3Q8BR65 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Suds3Q8BR65 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Suds3Q8BR65 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Suds3Q8BR65 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.72■□□□□ 0.27
Suds3Q8BR65 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Suds3Q8BR65 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Suds3Q8BR65 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Suds3Q8BR65 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Suds3Q8BR65 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Suds3Q8BR65 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Suds3Q8BR65 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Suds3Q8BR65 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Suds3Q8BR65 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Suds3Q8BR65 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Suds3Q8BR65 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Suds3Q8BR65 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Suds3Q8BR65 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms