Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpsf4Q8BQZ5 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpsf4Q8BQZ5 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.83■□□□□ 0.12
Cpsf4Q8BQZ5 Gm21559-201ENSMUST00000220638 855 ntBASIC15.83■□□□□ 0.12
Cpsf4Q8BQZ5 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cpsf4Q8BQZ5 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpsf4Q8BQZ5 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpsf4Q8BQZ5 Gm8587-201ENSMUST00000076538 843 ntBASIC15.83■□□□□ 0.12
Cpsf4Q8BQZ5 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpsf4Q8BQZ5 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpsf4Q8BQZ5 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Cpsf4Q8BQZ5 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Cpsf4Q8BQZ5 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Cpsf4Q8BQZ5 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Cpsf4Q8BQZ5 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Cpsf4Q8BQZ5 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpsf4Q8BQZ5 Actl10-202ENSMUST00000226583 1501 ntBASIC15.83■□□□□ 0.12
Cpsf4Q8BQZ5 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Cpsf4Q8BQZ5 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpsf4Q8BQZ5 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Cpsf4Q8BQZ5 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cpsf4Q8BQZ5 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpsf4Q8BQZ5 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.82■□□□□ 0.12
Cpsf4Q8BQZ5 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpsf4Q8BQZ5 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Cpsf4Q8BQZ5 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.82■□□□□ 0.12
Cpsf4Q8BQZ5 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.82■□□□□ 0.12
Cpsf4Q8BQZ5 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.82■□□□□ 0.12
Cpsf4Q8BQZ5 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpsf4Q8BQZ5 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpsf4Q8BQZ5 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpsf4Q8BQZ5 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpsf4Q8BQZ5 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpsf4Q8BQZ5 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cpsf4Q8BQZ5 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpsf4Q8BQZ5 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Cpsf4Q8BQZ5 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpsf4Q8BQZ5 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cpsf4Q8BQZ5 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.82■□□□□ 0.12
Cpsf4Q8BQZ5 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Cpsf4Q8BQZ5 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.82■□□□□ 0.12
Cpsf4Q8BQZ5 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.82■□□□□ 0.12
Cpsf4Q8BQZ5 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpsf4Q8BQZ5 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpsf4Q8BQZ5 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpsf4Q8BQZ5 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpsf4Q8BQZ5 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cpsf4Q8BQZ5 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpsf4Q8BQZ5 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpsf4Q8BQZ5 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cpsf4Q8BQZ5 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.81■□□□□ 0.12
Cpsf4Q8BQZ5 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpsf4Q8BQZ5 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpsf4Q8BQZ5 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cpsf4Q8BQZ5 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cpsf4Q8BQZ5 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.81■□□□□ 0.12
Cpsf4Q8BQZ5 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.81■□□□□ 0.12
Cpsf4Q8BQZ5 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cpsf4Q8BQZ5 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.81■□□□□ 0.12
Cpsf4Q8BQZ5 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cpsf4Q8BQZ5 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.81■□□□□ 0.12
Cpsf4Q8BQZ5 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.81■□□□□ 0.12
Cpsf4Q8BQZ5 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpsf4Q8BQZ5 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpsf4Q8BQZ5 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpsf4Q8BQZ5 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpsf4Q8BQZ5 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cpsf4Q8BQZ5 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpsf4Q8BQZ5 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpsf4Q8BQZ5 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpsf4Q8BQZ5 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf4Q8BQZ5 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf4Q8BQZ5 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf4Q8BQZ5 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf4Q8BQZ5 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf4Q8BQZ5 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Cpsf4Q8BQZ5 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf4Q8BQZ5 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Cpsf4Q8BQZ5 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Cpsf4Q8BQZ5 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf4Q8BQZ5 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf4Q8BQZ5 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf4Q8BQZ5 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf4Q8BQZ5 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf4Q8BQZ5 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.8■□□□□ 0.12
Cpsf4Q8BQZ5 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Cpsf4Q8BQZ5 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf4Q8BQZ5 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.8■□□□□ 0.12
Cpsf4Q8BQZ5 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.8■□□□□ 0.12
Cpsf4Q8BQZ5 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf4Q8BQZ5 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf4Q8BQZ5 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Cpsf4Q8BQZ5 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf4Q8BQZ5 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf4Q8BQZ5 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf4Q8BQZ5 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf4Q8BQZ5 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpsf4Q8BQZ5 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Cpsf4Q8BQZ5 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Cpsf4Q8BQZ5 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms