Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Col16a1Q8BLX7 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Col16a1Q8BLX7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Col16a1Q8BLX7 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Col16a1Q8BLX7 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Col16a1Q8BLX7 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Col16a1Q8BLX7 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Col16a1Q8BLX7 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Col16a1Q8BLX7 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col16a1Q8BLX7 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col16a1Q8BLX7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col16a1Q8BLX7 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col16a1Q8BLX7 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Col16a1Q8BLX7 Gm13127-201ENSMUST00000118978 1389 ntBASIC21.26■□□□□ 0.99
Col16a1Q8BLX7 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col16a1Q8BLX7 Gm13216-201ENSMUST00000117145 591 ntBASIC21.26■□□□□ 0.99
Col16a1Q8BLX7 Gm13616-201ENSMUST00000120600 222 ntBASIC21.26■□□□□ 0.99
Col16a1Q8BLX7 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
Col16a1Q8BLX7 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Col16a1Q8BLX7 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC21.26■□□□□ 0.99
Col16a1Q8BLX7 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Col16a1Q8BLX7 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col16a1Q8BLX7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col16a1Q8BLX7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col16a1Q8BLX7 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC21.26■□□□□ 0.99
Col16a1Q8BLX7 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col16a1Q8BLX7 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col16a1Q8BLX7 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC21.25■□□□□ 0.99
Col16a1Q8BLX7 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col16a1Q8BLX7 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Col16a1Q8BLX7 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col16a1Q8BLX7 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col16a1Q8BLX7 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col16a1Q8BLX7 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Col16a1Q8BLX7 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col16a1Q8BLX7 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col16a1Q8BLX7 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Col16a1Q8BLX7 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC21.25■□□□□ 0.99
Col16a1Q8BLX7 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC21.25■□□□□ 0.99
Col16a1Q8BLX7 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col16a1Q8BLX7 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col16a1Q8BLX7 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
Col16a1Q8BLX7 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Col16a1Q8BLX7 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col16a1Q8BLX7 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Col16a1Q8BLX7 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC21.25■□□□□ 0.99
Col16a1Q8BLX7 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col16a1Q8BLX7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col16a1Q8BLX7 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col16a1Q8BLX7 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Col16a1Q8BLX7 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col16a1Q8BLX7 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Col16a1Q8BLX7 Gm27321-201ENSMUST00000185021 205 ntBASIC21.24■□□□□ 0.99
Col16a1Q8BLX7 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col16a1Q8BLX7 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC21.24■□□□□ 0.99
Col16a1Q8BLX7 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col16a1Q8BLX7 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col16a1Q8BLX7 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC21.24■□□□□ 0.99
Col16a1Q8BLX7 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col16a1Q8BLX7 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col16a1Q8BLX7 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC21.24■□□□□ 0.99
Col16a1Q8BLX7 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Col16a1Q8BLX7 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC21.23■□□□□ 0.99
Col16a1Q8BLX7 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Col16a1Q8BLX7 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Col16a1Q8BLX7 Gm44492-201ENSMUST00000197012 141 ntBASIC21.23■□□□□ 0.99
Col16a1Q8BLX7 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col16a1Q8BLX7 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC21.23■□□□□ 0.99
Col16a1Q8BLX7 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col16a1Q8BLX7 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col16a1Q8BLX7 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col16a1Q8BLX7 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col16a1Q8BLX7 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.23■□□□□ 0.99
Col16a1Q8BLX7 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col16a1Q8BLX7 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col16a1Q8BLX7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Col16a1Q8BLX7 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col16a1Q8BLX7 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col16a1Q8BLX7 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Col16a1Q8BLX7 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col16a1Q8BLX7 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col16a1Q8BLX7 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Col16a1Q8BLX7 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col16a1Q8BLX7 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC21.23■□□□□ 0.99
Col16a1Q8BLX7 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC21.23■□□□□ 0.99
Col16a1Q8BLX7 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC21.23■□□□□ 0.99
Col16a1Q8BLX7 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col16a1Q8BLX7 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Col16a1Q8BLX7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col16a1Q8BLX7 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Col16a1Q8BLX7 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col16a1Q8BLX7 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Col16a1Q8BLX7 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
Col16a1Q8BLX7 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC21.22■□□□□ 0.99
Col16a1Q8BLX7 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC21.22■□□□□ 0.99
Col16a1Q8BLX7 Gm27494-201ENSMUST00000184735 189 ntBASIC21.22■□□□□ 0.99
Col16a1Q8BLX7 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col16a1Q8BLX7 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col16a1Q8BLX7 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Col16a1Q8BLX7 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms