Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcal1Q8BJL0 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.3■□□□□ 0.36
Smarcal1Q8BJL0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.3■□□□□ 0.36
Smarcal1Q8BJL0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcal1Q8BJL0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcal1Q8BJL0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcal1Q8BJL0 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcal1Q8BJL0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcal1Q8BJL0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcal1Q8BJL0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcal1Q8BJL0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcal1Q8BJL0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcal1Q8BJL0 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Smarcal1Q8BJL0 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Smarcal1Q8BJL0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcal1Q8BJL0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcal1Q8BJL0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Smarcal1Q8BJL0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcal1Q8BJL0 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcal1Q8BJL0 Gm7222-201ENSMUST00000117512 906 ntBASIC17.29■□□□□ 0.36
Smarcal1Q8BJL0 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.29■□□□□ 0.36
Smarcal1Q8BJL0 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.29■□□□□ 0.36
Smarcal1Q8BJL0 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.29■□□□□ 0.36
Smarcal1Q8BJL0 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcal1Q8BJL0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.29■□□□□ 0.36
Smarcal1Q8BJL0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcal1Q8BJL0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.29■□□□□ 0.36
Smarcal1Q8BJL0 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcal1Q8BJL0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcal1Q8BJL0 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcal1Q8BJL0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcal1Q8BJL0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcal1Q8BJL0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Smarcal1Q8BJL0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Smarcal1Q8BJL0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcal1Q8BJL0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcal1Q8BJL0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcal1Q8BJL0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcal1Q8BJL0 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcal1Q8BJL0 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcal1Q8BJL0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Smarcal1Q8BJL0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcal1Q8BJL0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcal1Q8BJL0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Smarcal1Q8BJL0 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.28■□□□□ 0.36
Smarcal1Q8BJL0 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Smarcal1Q8BJL0 Mir6404-201ENSMUST00000183699 94 ntBASIC17.28■□□□□ 0.36
Smarcal1Q8BJL0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcal1Q8BJL0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcal1Q8BJL0 Gm15590-201ENSMUST00000078419 552 ntBASIC17.28■□□□□ 0.36
Smarcal1Q8BJL0 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Smarcal1Q8BJL0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcal1Q8BJL0 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.28■□□□□ 0.36
Smarcal1Q8BJL0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcal1Q8BJL0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcal1Q8BJL0 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcal1Q8BJL0 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcal1Q8BJL0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcal1Q8BJL0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.27■□□□□ 0.36
Smarcal1Q8BJL0 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcal1Q8BJL0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcal1Q8BJL0 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcal1Q8BJL0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcal1Q8BJL0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcal1Q8BJL0 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.27■□□□□ 0.36
Smarcal1Q8BJL0 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcal1Q8BJL0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Smarcal1Q8BJL0 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcal1Q8BJL0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Smarcal1Q8BJL0 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcal1Q8BJL0 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcal1Q8BJL0 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.27■□□□□ 0.36
Smarcal1Q8BJL0 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.27■□□□□ 0.35
Smarcal1Q8BJL0 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Smarcal1Q8BJL0 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcal1Q8BJL0 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcal1Q8BJL0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcal1Q8BJL0 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcal1Q8BJL0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcal1Q8BJL0 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcal1Q8BJL0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcal1Q8BJL0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcal1Q8BJL0 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcal1Q8BJL0 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcal1Q8BJL0 Gm14140-201ENSMUST00000119999 995 ntBASIC17.26■□□□□ 0.35
Smarcal1Q8BJL0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcal1Q8BJL0 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.26■□□□□ 0.35
Smarcal1Q8BJL0 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.26■□□□□ 0.35
Smarcal1Q8BJL0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcal1Q8BJL0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.26■□□□□ 0.35
Smarcal1Q8BJL0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcal1Q8BJL0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcal1Q8BJL0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.26■□□□□ 0.35
Smarcal1Q8BJL0 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcal1Q8BJL0 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Smarcal1Q8BJL0 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Smarcal1Q8BJL0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcal1Q8BJL0 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcal1Q8BJL0 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcal1Q8BJL0 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms