Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp2bQ8BJF9 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp2bQ8BJF9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp2bQ8BJF9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp2bQ8BJF9 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp2bQ8BJF9 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp2bQ8BJF9 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp2bQ8BJF9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp2bQ8BJF9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp2bQ8BJF9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp2bQ8BJF9 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp2bQ8BJF9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp2bQ8BJF9 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Chmp2bQ8BJF9 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp2bQ8BJF9 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp2bQ8BJF9 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp2bQ8BJF9 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp2bQ8BJF9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp2bQ8BJF9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Chmp2bQ8BJF9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp2bQ8BJF9 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp2bQ8BJF9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp2bQ8BJF9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp2bQ8BJF9 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp2bQ8BJF9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.69■□□□□ 0.26
Chmp2bQ8BJF9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp2bQ8BJF9 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Chmp2bQ8BJF9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp2bQ8BJF9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp2bQ8BJF9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.69■□□□□ 0.26
Chmp2bQ8BJF9 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Chmp2bQ8BJF9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp2bQ8BJF9 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.69■□□□□ 0.26
Chmp2bQ8BJF9 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp2bQ8BJF9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp2bQ8BJF9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp2bQ8BJF9 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp2bQ8BJF9 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Chmp2bQ8BJF9 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.69■□□□□ 0.26
Chmp2bQ8BJF9 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp2bQ8BJF9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp2bQ8BJF9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Chmp2bQ8BJF9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Chmp2bQ8BJF9 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Chmp2bQ8BJF9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp2bQ8BJF9 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp2bQ8BJF9 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp2bQ8BJF9 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp2bQ8BJF9 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Chmp2bQ8BJF9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.68■□□□□ 0.26
Chmp2bQ8BJF9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.68■□□□□ 0.26
Chmp2bQ8BJF9 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.68■□□□□ 0.26
Chmp2bQ8BJF9 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp2bQ8BJF9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp2bQ8BJF9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp2bQ8BJF9 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Chmp2bQ8BJF9 Actl10-202ENSMUST00000226583 1501 ntBASIC16.68■□□□□ 0.26
Chmp2bQ8BJF9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp2bQ8BJF9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp2bQ8BJF9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp2bQ8BJF9 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Chmp2bQ8BJF9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.68■□□□□ 0.26
Chmp2bQ8BJF9 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Chmp2bQ8BJF9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.68■□□□□ 0.26
Chmp2bQ8BJF9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp2bQ8BJF9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp2bQ8BJF9 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp2bQ8BJF9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp2bQ8BJF9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp2bQ8BJF9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp2bQ8BJF9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.68■□□□□ 0.26
Chmp2bQ8BJF9 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp2bQ8BJF9 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp2bQ8BJF9 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.67■□□□□ 0.26
Chmp2bQ8BJF9 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.67■□□□□ 0.26
Chmp2bQ8BJF9 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp2bQ8BJF9 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp2bQ8BJF9 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp2bQ8BJF9 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.67■□□□□ 0.26
Chmp2bQ8BJF9 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp2bQ8BJF9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Chmp2bQ8BJF9 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.67■□□□□ 0.26
Chmp2bQ8BJF9 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp2bQ8BJF9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Chmp2bQ8BJF9 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.67■□□□□ 0.26
Chmp2bQ8BJF9 Gm8520-201ENSMUST00000186517 868 ntBASIC16.67■□□□□ 0.26
Chmp2bQ8BJF9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.67■□□□□ 0.26
Chmp2bQ8BJF9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp2bQ8BJF9 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp2bQ8BJF9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp2bQ8BJF9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Chmp2bQ8BJF9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp2bQ8BJF9 Phf7-203ENSMUST00000226565 1971 ntBASIC16.67■□□□□ 0.26
Chmp2bQ8BJF9 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp2bQ8BJF9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp2bQ8BJF9 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp2bQ8BJF9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp2bQ8BJF9 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp2bQ8BJF9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.67■□□□□ 0.26
Chmp2bQ8BJF9 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms