Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.94■□□□□ 0.14
Pcdh20Q8BIZ0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh20Q8BIZ0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh20Q8BIZ0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh20Q8BIZ0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh20Q8BIZ0 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh20Q8BIZ0 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh20Q8BIZ0 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Pcdh20Q8BIZ0 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.94■□□□□ 0.14
Pcdh20Q8BIZ0 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh20Q8BIZ0 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Pcdh20Q8BIZ0 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Pcdh20Q8BIZ0 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Pcdh20Q8BIZ0 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh20Q8BIZ0 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Pcdh20Q8BIZ0 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh20Q8BIZ0 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh20Q8BIZ0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Pcdh20Q8BIZ0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
Pcdh20Q8BIZ0 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh20Q8BIZ0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh20Q8BIZ0 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh20Q8BIZ0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh20Q8BIZ0 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh20Q8BIZ0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh20Q8BIZ0 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
Pcdh20Q8BIZ0 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh20Q8BIZ0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.93■□□□□ 0.14
Pcdh20Q8BIZ0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh20Q8BIZ0 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Pcdh20Q8BIZ0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.93■□□□□ 0.14
Pcdh20Q8BIZ0 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh20Q8BIZ0 Gm18032-201ENSMUST00000222541 538 ntBASIC15.93■□□□□ 0.14
Pcdh20Q8BIZ0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Pcdh20Q8BIZ0 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh20Q8BIZ0 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh20Q8BIZ0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
Pcdh20Q8BIZ0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh20Q8BIZ0 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh20Q8BIZ0 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh20Q8BIZ0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh20Q8BIZ0 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh20Q8BIZ0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Pcdh20Q8BIZ0 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Pcdh20Q8BIZ0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Pcdh20Q8BIZ0 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Pcdh20Q8BIZ0 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh20Q8BIZ0 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh20Q8BIZ0 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh20Q8BIZ0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
Pcdh20Q8BIZ0 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh20Q8BIZ0 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh20Q8BIZ0 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh20Q8BIZ0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh20Q8BIZ0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.92■□□□□ 0.14
Pcdh20Q8BIZ0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh20Q8BIZ0 Gm18101-201ENSMUST00000215769 548 ntBASIC15.92■□□□□ 0.14
Pcdh20Q8BIZ0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh20Q8BIZ0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Pcdh20Q8BIZ0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh20Q8BIZ0 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh20Q8BIZ0 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh20Q8BIZ0 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.92■□□□□ 0.14
Pcdh20Q8BIZ0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh20Q8BIZ0 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.92■□□□□ 0.14
Pcdh20Q8BIZ0 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh20Q8BIZ0 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh20Q8BIZ0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Pcdh20Q8BIZ0 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdh20Q8BIZ0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.91■□□□□ 0.14
Pcdh20Q8BIZ0 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh20Q8BIZ0 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh20Q8BIZ0 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh20Q8BIZ0 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh20Q8BIZ0 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh20Q8BIZ0 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh20Q8BIZ0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh20Q8BIZ0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.91■□□□□ 0.14
Pcdh20Q8BIZ0 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
Pcdh20Q8BIZ0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh20Q8BIZ0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdh20Q8BIZ0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh20Q8BIZ0 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh20Q8BIZ0 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh20Q8BIZ0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh20Q8BIZ0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh20Q8BIZ0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.9■□□□□ 0.14
Pcdh20Q8BIZ0 Gm7370-201ENSMUST00000219471 767 ntBASIC15.9■□□□□ 0.14
Pcdh20Q8BIZ0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh20Q8BIZ0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh20Q8BIZ0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh20Q8BIZ0 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh20Q8BIZ0 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh20Q8BIZ0 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
Pcdh20Q8BIZ0 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Pcdh20Q8BIZ0 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh20Q8BIZ0 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh20Q8BIZ0 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh20Q8BIZ0 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.9■□□□□ 0.14
Pcdh20Q8BIZ0 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms