Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc40Q8BI79 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.99■□□□□ 0.31
Ccdc40Q8BI79 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc40Q8BI79 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc40Q8BI79 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.99■□□□□ 0.31
Ccdc40Q8BI79 Gm13186-201ENSMUST00000118031 316 ntBASIC16.99■□□□□ 0.31
Ccdc40Q8BI79 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.99■□□□□ 0.31
Ccdc40Q8BI79 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.99■□□□□ 0.31
Ccdc40Q8BI79 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.99■□□□□ 0.31
Ccdc40Q8BI79 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc40Q8BI79 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc40Q8BI79 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Ccdc40Q8BI79 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc40Q8BI79 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc40Q8BI79 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc40Q8BI79 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc40Q8BI79 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc40Q8BI79 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc40Q8BI79 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc40Q8BI79 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc40Q8BI79 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc40Q8BI79 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc40Q8BI79 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc40Q8BI79 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc40Q8BI79 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc40Q8BI79 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.98■□□□□ 0.31
Ccdc40Q8BI79 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc40Q8BI79 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Ccdc40Q8BI79 Gm10252-201ENSMUST00000209541 832 ntBASIC16.98■□□□□ 0.31
Ccdc40Q8BI79 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc40Q8BI79 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.98■□□□□ 0.31
Ccdc40Q8BI79 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.98■□□□□ 0.31
Ccdc40Q8BI79 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Ccdc40Q8BI79 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc40Q8BI79 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc40Q8BI79 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Ccdc40Q8BI79 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc40Q8BI79 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc40Q8BI79 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc40Q8BI79 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc40Q8BI79 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc40Q8BI79 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc40Q8BI79 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc40Q8BI79 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc40Q8BI79 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc40Q8BI79 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc40Q8BI79 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc40Q8BI79 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc40Q8BI79 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc40Q8BI79 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc40Q8BI79 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Ccdc40Q8BI79 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc40Q8BI79 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc40Q8BI79 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc40Q8BI79 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.97■□□□□ 0.31
Ccdc40Q8BI79 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc40Q8BI79 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc40Q8BI79 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Ccdc40Q8BI79 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc40Q8BI79 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc40Q8BI79 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.97■□□□□ 0.31
Ccdc40Q8BI79 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.97■□□□□ 0.31
Ccdc40Q8BI79 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc40Q8BI79 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.97■□□□□ 0.31
Ccdc40Q8BI79 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc40Q8BI79 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc40Q8BI79 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc40Q8BI79 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc40Q8BI79 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Ccdc40Q8BI79 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc40Q8BI79 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc40Q8BI79 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc40Q8BI79 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc40Q8BI79 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.96■□□□□ 0.31
Ccdc40Q8BI79 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc40Q8BI79 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc40Q8BI79 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc40Q8BI79 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc40Q8BI79 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Ccdc40Q8BI79 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Ccdc40Q8BI79 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc40Q8BI79 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
Ccdc40Q8BI79 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Ccdc40Q8BI79 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.96■□□□□ 0.31
Ccdc40Q8BI79 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.96■□□□□ 0.31
Ccdc40Q8BI79 Gm43799-201ENSMUST00000201845 579 ntBASIC16.96■□□□□ 0.31
Ccdc40Q8BI79 Gm18115-201ENSMUST00000221209 621 ntBASIC16.96■□□□□ 0.31
Ccdc40Q8BI79 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc40Q8BI79 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc40Q8BI79 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc40Q8BI79 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Ccdc40Q8BI79 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.96■□□□□ 0.31
Ccdc40Q8BI79 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Ccdc40Q8BI79 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ccdc40Q8BI79 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Ccdc40Q8BI79 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ccdc40Q8BI79 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ccdc40Q8BI79 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc40Q8BI79 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc40Q8BI79 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms