Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Clrn3Q8BHH8 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clrn3Q8BHH8 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clrn3Q8BHH8 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clrn3Q8BHH8 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clrn3Q8BHH8 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clrn3Q8BHH8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Clrn3Q8BHH8 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clrn3Q8BHH8 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Clrn3Q8BHH8 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clrn3Q8BHH8 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clrn3Q8BHH8 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Clrn3Q8BHH8 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.29■□□□□ 0.04
Clrn3Q8BHH8 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn3Q8BHH8 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn3Q8BHH8 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn3Q8BHH8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn3Q8BHH8 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Clrn3Q8BHH8 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn3Q8BHH8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn3Q8BHH8 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn3Q8BHH8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Clrn3Q8BHH8 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn3Q8BHH8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn3Q8BHH8 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn3Q8BHH8 Gm10231-201ENSMUST00000181584 441 ntBASIC15.28■□□□□ 0.04
Clrn3Q8BHH8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn3Q8BHH8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Clrn3Q8BHH8 Gm10175-202ENSMUST00000208752 441 ntBASIC15.28■□□□□ 0.04
Clrn3Q8BHH8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.28■□□□□ 0.04
Clrn3Q8BHH8 Gm21559-201ENSMUST00000220638 855 ntBASIC15.28■□□□□ 0.04
Clrn3Q8BHH8 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.28■□□□□ 0.04
Clrn3Q8BHH8 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn3Q8BHH8 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn3Q8BHH8 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn3Q8BHH8 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn3Q8BHH8 Gm8587-201ENSMUST00000076538 843 ntBASIC15.28■□□□□ 0.04
Clrn3Q8BHH8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn3Q8BHH8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn3Q8BHH8 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Clrn3Q8BHH8 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn3Q8BHH8 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn3Q8BHH8 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn3Q8BHH8 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.28■□□□□ 0.04
Clrn3Q8BHH8 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn3Q8BHH8 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clrn3Q8BHH8 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clrn3Q8BHH8 Phf7-203ENSMUST00000226565 1971 ntBASIC15.27■□□□□ 0.04
Clrn3Q8BHH8 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clrn3Q8BHH8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clrn3Q8BHH8 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clrn3Q8BHH8 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clrn3Q8BHH8 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Clrn3Q8BHH8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clrn3Q8BHH8 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Clrn3Q8BHH8 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Clrn3Q8BHH8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Clrn3Q8BHH8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.27■□□□□ 0.04
Clrn3Q8BHH8 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clrn3Q8BHH8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clrn3Q8BHH8 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clrn3Q8BHH8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clrn3Q8BHH8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms