Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Samm50Q8BGH2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Samm50Q8BGH2 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Samm50Q8BGH2 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Samm50Q8BGH2 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
Samm50Q8BGH2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Samm50Q8BGH2 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Samm50Q8BGH2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.12■□□□□ 0.65
Samm50Q8BGH2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Samm50Q8BGH2 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Samm50Q8BGH2 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.12■□□□□ 0.65
Samm50Q8BGH2 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Samm50Q8BGH2 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Samm50Q8BGH2 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Samm50Q8BGH2 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Samm50Q8BGH2 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Samm50Q8BGH2 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Samm50Q8BGH2 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Samm50Q8BGH2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Samm50Q8BGH2 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Samm50Q8BGH2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Samm50Q8BGH2 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC19.11■□□□□ 0.65
Samm50Q8BGH2 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Samm50Q8BGH2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Samm50Q8BGH2 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Samm50Q8BGH2 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Samm50Q8BGH2 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Samm50Q8BGH2 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Samm50Q8BGH2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Samm50Q8BGH2 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Samm50Q8BGH2 Gm27389-201ENSMUST00000183622 195 ntBASIC19.11■□□□□ 0.65
Samm50Q8BGH2 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Samm50Q8BGH2 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Samm50Q8BGH2 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Samm50Q8BGH2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Samm50Q8BGH2 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Samm50Q8BGH2 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Samm50Q8BGH2 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Samm50Q8BGH2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Samm50Q8BGH2 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Samm50Q8BGH2 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Samm50Q8BGH2 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Samm50Q8BGH2 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Samm50Q8BGH2 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Samm50Q8BGH2 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Samm50Q8BGH2 Mir1668-201ENSMUST00000184114 107 ntBASIC19.1■□□□□ 0.65
Samm50Q8BGH2 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Samm50Q8BGH2 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Samm50Q8BGH2 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Samm50Q8BGH2 AC093043.3-201ENSMUST00000226531 2273 ntBASIC19.1■□□□□ 0.65
Samm50Q8BGH2 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Samm50Q8BGH2 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Samm50Q8BGH2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Samm50Q8BGH2 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
Samm50Q8BGH2 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Samm50Q8BGH2 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Samm50Q8BGH2 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Samm50Q8BGH2 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Samm50Q8BGH2 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Samm50Q8BGH2 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Samm50Q8BGH2 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Samm50Q8BGH2 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Samm50Q8BGH2 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Samm50Q8BGH2 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Samm50Q8BGH2 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Samm50Q8BGH2 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Samm50Q8BGH2 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Samm50Q8BGH2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Samm50Q8BGH2 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Samm50Q8BGH2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.09■□□□□ 0.65
Samm50Q8BGH2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.09■□□□□ 0.65
Samm50Q8BGH2 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Samm50Q8BGH2 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Samm50Q8BGH2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.09■□□□□ 0.65
Samm50Q8BGH2 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Samm50Q8BGH2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Samm50Q8BGH2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Samm50Q8BGH2 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Samm50Q8BGH2 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Samm50Q8BGH2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Samm50Q8BGH2 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Samm50Q8BGH2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Samm50Q8BGH2 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Samm50Q8BGH2 Gm23634-201ENSMUST00000175071 91 ntBASIC19.08■□□□□ 0.64
Samm50Q8BGH2 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Samm50Q8BGH2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Samm50Q8BGH2 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Samm50Q8BGH2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Samm50Q8BGH2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Samm50Q8BGH2 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Samm50Q8BGH2 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Samm50Q8BGH2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Samm50Q8BGH2 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Samm50Q8BGH2 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Samm50Q8BGH2 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Samm50Q8BGH2 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Samm50Q8BGH2 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Samm50Q8BGH2 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Samm50Q8BGH2 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Samm50Q8BGH2 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms