Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim50Q810I2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim50Q810I2 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim50Q810I2 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim50Q810I2 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim50Q810I2 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.89■□□□□ 0.13
Trim50Q810I2 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.89■□□□□ 0.13
Trim50Q810I2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim50Q810I2 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
Trim50Q810I2 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.89■□□□□ 0.13
Trim50Q810I2 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Trim50Q810I2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
Trim50Q810I2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trim50Q810I2 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim50Q810I2 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim50Q810I2 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim50Q810I2 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim50Q810I2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim50Q810I2 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.88■□□□□ 0.13
Trim50Q810I2 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trim50Q810I2 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.88■□□□□ 0.13
Trim50Q810I2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim50Q810I2 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Trim50Q810I2 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.88■□□□□ 0.13
Trim50Q810I2 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim50Q810I2 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim50Q810I2 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim50Q810I2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.88■□□□□ 0.13
Trim50Q810I2 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trim50Q810I2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim50Q810I2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim50Q810I2 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim50Q810I2 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim50Q810I2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.87■□□□□ 0.13
Trim50Q810I2 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.87■□□□□ 0.13
Trim50Q810I2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Trim50Q810I2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim50Q810I2 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.87■□□□□ 0.13
Trim50Q810I2 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim50Q810I2 Gm23634-201ENSMUST00000175071 91 ntBASIC15.87■□□□□ 0.13
Trim50Q810I2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.87■□□□□ 0.13
Trim50Q810I2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.87■□□□□ 0.13
Trim50Q810I2 Gm5587-201ENSMUST00000206270 674 ntBASIC15.87■□□□□ 0.13
Trim50Q810I2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim50Q810I2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim50Q810I2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim50Q810I2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim50Q810I2 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim50Q810I2 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim50Q810I2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.87■□□□□ 0.13
Trim50Q810I2 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim50Q810I2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim50Q810I2 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.87■□□□□ 0.13
Trim50Q810I2 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim50Q810I2 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim50Q810I2 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim50Q810I2 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim50Q810I2 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim50Q810I2 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim50Q810I2 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim50Q810I2 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trim50Q810I2 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim50Q810I2 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trim50Q810I2 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim50Q810I2 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim50Q810I2 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim50Q810I2 Mir770-201ENSMUST00000103252 94 ntBASIC15.86■□□□□ 0.13
Trim50Q810I2 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim50Q810I2 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim50Q810I2 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
Trim50Q810I2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trim50Q810I2 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim50Q810I2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim50Q810I2 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim50Q810I2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim50Q810I2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim50Q810I2 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim50Q810I2 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim50Q810I2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim50Q810I2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim50Q810I2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim50Q810I2 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim50Q810I2 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim50Q810I2 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim50Q810I2 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Trim50Q810I2 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim50Q810I2 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim50Q810I2 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim50Q810I2 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim50Q810I2 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim50Q810I2 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim50Q810I2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim50Q810I2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim50Q810I2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.85■□□□□ 0.13
Trim50Q810I2 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.85■□□□□ 0.13
Trim50Q810I2 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim50Q810I2 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.85■□□□□ 0.13
Trim50Q810I2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim50Q810I2 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim50Q810I2 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms