Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trnp1Q80ZI1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trnp1Q80ZI1 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trnp1Q80ZI1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trnp1Q80ZI1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trnp1Q80ZI1 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Trnp1Q80ZI1 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trnp1Q80ZI1 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trnp1Q80ZI1 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.3■□□□□ 0.52
Trnp1Q80ZI1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trnp1Q80ZI1 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trnp1Q80ZI1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trnp1Q80ZI1 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trnp1Q80ZI1 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trnp1Q80ZI1 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.3■□□□□ 0.52
Trnp1Q80ZI1 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Trnp1Q80ZI1 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trnp1Q80ZI1 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trnp1Q80ZI1 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trnp1Q80ZI1 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trnp1Q80ZI1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trnp1Q80ZI1 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trnp1Q80ZI1 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trnp1Q80ZI1 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trnp1Q80ZI1 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trnp1Q80ZI1 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trnp1Q80ZI1 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trnp1Q80ZI1 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trnp1Q80ZI1 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Trnp1Q80ZI1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trnp1Q80ZI1 Gm13616-201ENSMUST00000120600 222 ntBASIC18.29■□□□□ 0.52
Trnp1Q80ZI1 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.29■□□□□ 0.52
Trnp1Q80ZI1 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trnp1Q80ZI1 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC18.29■□□□□ 0.52
Trnp1Q80ZI1 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC18.29■□□□□ 0.52
Trnp1Q80ZI1 Gm17968-201ENSMUST00000194902 784 ntBASIC18.29■□□□□ 0.52
Trnp1Q80ZI1 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC18.29■□□□□ 0.52
Trnp1Q80ZI1 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.29■□□□□ 0.52
Trnp1Q80ZI1 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trnp1Q80ZI1 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trnp1Q80ZI1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.29■□□□□ 0.52
Trnp1Q80ZI1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trnp1Q80ZI1 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Trnp1Q80ZI1 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trnp1Q80ZI1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trnp1Q80ZI1 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Trnp1Q80ZI1 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trnp1Q80ZI1 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trnp1Q80ZI1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Trnp1Q80ZI1 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.28■□□□□ 0.52
Trnp1Q80ZI1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trnp1Q80ZI1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trnp1Q80ZI1 Gm8344-201ENSMUST00000119813 856 ntBASIC18.28■□□□□ 0.52
Trnp1Q80ZI1 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trnp1Q80ZI1 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Trnp1Q80ZI1 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trnp1Q80ZI1 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Trnp1Q80ZI1 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trnp1Q80ZI1 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.28■□□□□ 0.52
Trnp1Q80ZI1 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trnp1Q80ZI1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Trnp1Q80ZI1 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trnp1Q80ZI1 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trnp1Q80ZI1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Trnp1Q80ZI1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trnp1Q80ZI1 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trnp1Q80ZI1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trnp1Q80ZI1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trnp1Q80ZI1 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trnp1Q80ZI1 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trnp1Q80ZI1 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trnp1Q80ZI1 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trnp1Q80ZI1 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.27■□□□□ 0.52
Trnp1Q80ZI1 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trnp1Q80ZI1 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trnp1Q80ZI1 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trnp1Q80ZI1 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trnp1Q80ZI1 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC18.27■□□□□ 0.52
Trnp1Q80ZI1 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trnp1Q80ZI1 AA543401-201ENSMUST00000164248 1269 ntBASIC18.27■□□□□ 0.52
Trnp1Q80ZI1 Gm27321-201ENSMUST00000185021 205 ntBASIC18.27■□□□□ 0.52
Trnp1Q80ZI1 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.27■□□□□ 0.52
Trnp1Q80ZI1 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trnp1Q80ZI1 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trnp1Q80ZI1 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.27■□□□□ 0.52
Trnp1Q80ZI1 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Trnp1Q80ZI1 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trnp1Q80ZI1 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Trnp1Q80ZI1 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trnp1Q80ZI1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trnp1Q80ZI1 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trnp1Q80ZI1 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
Trnp1Q80ZI1 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trnp1Q80ZI1 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trnp1Q80ZI1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trnp1Q80ZI1 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.26■□□□□ 0.51
Trnp1Q80ZI1 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.26■□□□□ 0.51
Trnp1Q80ZI1 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trnp1Q80ZI1 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trnp1Q80ZI1 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms