Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3bQ80YF6 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3bQ80YF6 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3bQ80YF6 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3bQ80YF6 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3bQ80YF6 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3bQ80YF6 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3bQ80YF6 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Upk3bQ80YF6 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.8□□□□□ -0.2
Upk3bQ80YF6 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3bQ80YF6 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3bQ80YF6 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3bQ80YF6 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3bQ80YF6 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3bQ80YF6 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3bQ80YF6 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3bQ80YF6 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3bQ80YF6 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Upk3bQ80YF6 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk3bQ80YF6 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk3bQ80YF6 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Upk3bQ80YF6 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.79□□□□□ -0.2
Upk3bQ80YF6 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk3bQ80YF6 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk3bQ80YF6 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.79□□□□□ -0.2
Upk3bQ80YF6 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk3bQ80YF6 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Upk3bQ80YF6 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Upk3bQ80YF6 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Upk3bQ80YF6 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.79□□□□□ -0.2
Upk3bQ80YF6 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC13.79□□□□□ -0.2
Upk3bQ80YF6 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk3bQ80YF6 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Upk3bQ80YF6 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.79□□□□□ -0.2
Upk3bQ80YF6 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk3bQ80YF6 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk3bQ80YF6 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Upk3bQ80YF6 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk3bQ80YF6 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk3bQ80YF6 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk3bQ80YF6 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk3bQ80YF6 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk3bQ80YF6 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk3bQ80YF6 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk3bQ80YF6 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk3bQ80YF6 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk3bQ80YF6 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk3bQ80YF6 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Upk3bQ80YF6 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Upk3bQ80YF6 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.78□□□□□ -0.2
Upk3bQ80YF6 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Upk3bQ80YF6 Gm10698-201ENSMUST00000182663 604 ntBASIC13.78□□□□□ -0.2
Upk3bQ80YF6 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.78□□□□□ -0.2
Upk3bQ80YF6 Gm7791-201ENSMUST00000219066 539 ntBASIC13.78□□□□□ -0.2
Upk3bQ80YF6 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.78□□□□□ -0.2
Upk3bQ80YF6 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Upk3bQ80YF6 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Upk3bQ80YF6 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Upk3bQ80YF6 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Upk3bQ80YF6 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Upk3bQ80YF6 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Upk3bQ80YF6 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Upk3bQ80YF6 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Upk3bQ80YF6 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk3bQ80YF6 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk3bQ80YF6 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Upk3bQ80YF6 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Upk3bQ80YF6 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Upk3bQ80YF6 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Upk3bQ80YF6 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.77□□□□□ -0.21
Upk3bQ80YF6 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.77□□□□□ -0.21
Upk3bQ80YF6 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upk3bQ80YF6 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Upk3bQ80YF6 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upk3bQ80YF6 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upk3bQ80YF6 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Upk3bQ80YF6 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.77□□□□□ -0.21
Upk3bQ80YF6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upk3bQ80YF6 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upk3bQ80YF6 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Upk3bQ80YF6 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upk3bQ80YF6 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upk3bQ80YF6 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upk3bQ80YF6 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
Upk3bQ80YF6 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upk3bQ80YF6 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upk3bQ80YF6 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Upk3bQ80YF6 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Upk3bQ80YF6 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3bQ80YF6 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3bQ80YF6 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3bQ80YF6 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Upk3bQ80YF6 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3bQ80YF6 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3bQ80YF6 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3bQ80YF6 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3bQ80YF6 Gm13181-201ENSMUST00000120117 1069 ntBASIC13.76□□□□□ -0.21
Upk3bQ80YF6 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Upk3bQ80YF6 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.76□□□□□ -0.21
Upk3bQ80YF6 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms