Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.52■□□□□ 0.08
Vrk1Q80X41 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.52■□□□□ 0.08
Vrk1Q80X41 Gm27525-201ENSMUST00000184465 107 ntBASIC15.52■□□□□ 0.08
Vrk1Q80X41 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.52■□□□□ 0.08
Vrk1Q80X41 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Vrk1Q80X41 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Vrk1Q80X41 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vrk1Q80X41 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Vrk1Q80X41 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Vrk1Q80X41 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Vrk1Q80X41 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vrk1Q80X41 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Vrk1Q80X41 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vrk1Q80X41 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Vrk1Q80X41 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vrk1Q80X41 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vrk1Q80X41 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.51■□□□□ 0.07
Vrk1Q80X41 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.51■□□□□ 0.07
Vrk1Q80X41 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Vrk1Q80X41 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Mir5131-201ENSMUST00000175426 93 ntBASIC15.51■□□□□ 0.07
Vrk1Q80X41 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.5■□□□□ 0.07
Vrk1Q80X41 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Vrk1Q80X41 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Vrk1Q80X41 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.5■□□□□ 0.07
Vrk1Q80X41 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Gm25745-201ENSMUST00000174945 133 ntBASIC15.49■□□□□ 0.07
Vrk1Q80X41 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Gm10060-201ENSMUST00000212002 111 ntBASIC15.49■□□□□ 0.07
Vrk1Q80X41 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.49■□□□□ 0.07
Vrk1Q80X41 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.49■□□□□ 0.07
Vrk1Q80X41 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms