Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.52■□□□□ 0.08
Vrk1Q80X41 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.52■□□□□ 0.08
Vrk1Q80X41 Gm27525-201ENSMUST00000184465 107 ntBASIC15.52■□□□□ 0.08
Vrk1Q80X41 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.52■□□□□ 0.08
Vrk1Q80X41 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Vrk1Q80X41 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Vrk1Q80X41 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vrk1Q80X41 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Vrk1Q80X41 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Vrk1Q80X41 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Vrk1Q80X41 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vrk1Q80X41 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Vrk1Q80X41 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vrk1Q80X41 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Vrk1Q80X41 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vrk1Q80X41 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vrk1Q80X41 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.51■□□□□ 0.07
Vrk1Q80X41 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.51■□□□□ 0.07
Vrk1Q80X41 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Vrk1Q80X41 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Mir5131-201ENSMUST00000175426 93 ntBASIC15.51■□□□□ 0.07
Vrk1Q80X41 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Vrk1Q80X41 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.5■□□□□ 0.07
Vrk1Q80X41 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Vrk1Q80X41 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Vrk1Q80X41 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.5■□□□□ 0.07
Vrk1Q80X41 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Vrk1Q80X41 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Gm25745-201ENSMUST00000174945 133 ntBASIC15.49■□□□□ 0.07
Vrk1Q80X41 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Gm10060-201ENSMUST00000212002 111 ntBASIC15.49■□□□□ 0.07
Vrk1Q80X41 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.49■□□□□ 0.07
Vrk1Q80X41 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.49■□□□□ 0.07
Vrk1Q80X41 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Vrk1Q80X41 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms