Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf40bQ80W14 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf40bQ80W14 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf40bQ80W14 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf40bQ80W14 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf40bQ80W14 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf40bQ80W14 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.74■□□□□ 0.59
Prpf40bQ80W14 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf40bQ80W14 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf40bQ80W14 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf40bQ80W14 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf40bQ80W14 Gm23935-201ENSMUST00000102303 57 ntBASIC18.74■□□□□ 0.59
Prpf40bQ80W14 Gm24270-201ENSMUST00000102326 57 ntBASIC18.74■□□□□ 0.59
Prpf40bQ80W14 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf40bQ80W14 Gm24245-201ENSMUST00000157318 57 ntBASIC18.74■□□□□ 0.59
Prpf40bQ80W14 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.74■□□□□ 0.59
Prpf40bQ80W14 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.74■□□□□ 0.59
Prpf40bQ80W14 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf40bQ80W14 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Prpf40bQ80W14 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Prpf40bQ80W14 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf40bQ80W14 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf40bQ80W14 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf40bQ80W14 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf40bQ80W14 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf40bQ80W14 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf40bQ80W14 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf40bQ80W14 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Prpf40bQ80W14 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf40bQ80W14 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf40bQ80W14 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Prpf40bQ80W14 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf40bQ80W14 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf40bQ80W14 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf40bQ80W14 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Prpf40bQ80W14 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf40bQ80W14 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf40bQ80W14 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf40bQ80W14 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf40bQ80W14 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf40bQ80W14 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf40bQ80W14 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf40bQ80W14 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf40bQ80W14 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf40bQ80W14 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf40bQ80W14 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf40bQ80W14 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf40bQ80W14 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf40bQ80W14 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Prpf40bQ80W14 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf40bQ80W14 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Prpf40bQ80W14 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf40bQ80W14 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf40bQ80W14 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf40bQ80W14 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf40bQ80W14 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf40bQ80W14 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.72■□□□□ 0.59
Prpf40bQ80W14 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf40bQ80W14 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf40bQ80W14 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf40bQ80W14 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf40bQ80W14 Gm27867-201ENSMUST00000184778 125 ntBASIC18.72■□□□□ 0.59
Prpf40bQ80W14 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Prpf40bQ80W14 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Prpf40bQ80W14 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf40bQ80W14 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Prpf40bQ80W14 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf40bQ80W14 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf40bQ80W14 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Prpf40bQ80W14 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf40bQ80W14 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prpf40bQ80W14 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.71■□□□□ 0.59
Prpf40bQ80W14 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prpf40bQ80W14 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prpf40bQ80W14 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Prpf40bQ80W14 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prpf40bQ80W14 Rprl3-201ENSMUST00000157400 290 ntBASIC18.71■□□□□ 0.59
Prpf40bQ80W14 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prpf40bQ80W14 Gm10576-201ENSMUST00000191927 825 ntBASIC18.71■□□□□ 0.59
Prpf40bQ80W14 Gm2756-201ENSMUST00000195851 400 ntBASIC18.71■□□□□ 0.59
Prpf40bQ80W14 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prpf40bQ80W14 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
Prpf40bQ80W14 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prpf40bQ80W14 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prpf40bQ80W14 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prpf40bQ80W14 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Prpf40bQ80W14 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prpf40bQ80W14 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prpf40bQ80W14 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Prpf40bQ80W14 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prpf40bQ80W14 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Prpf40bQ80W14 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Prpf40bQ80W14 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Prpf40bQ80W14 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.7■□□□□ 0.58
Prpf40bQ80W14 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.7■□□□□ 0.58
Prpf40bQ80W14 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Prpf40bQ80W14 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Prpf40bQ80W14 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.7■□□□□ 0.58
Prpf40bQ80W14 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.7■□□□□ 0.58
Prpf40bQ80W14 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms