Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Sh3tc2Q80VA5 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3tc2Q80VA5 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3tc2Q80VA5 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3tc2Q80VA5 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3tc2Q80VA5 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3tc2Q80VA5 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3tc2Q80VA5 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3tc2Q80VA5 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3tc2Q80VA5 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3tc2Q80VA5 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Sh3tc2Q80VA5 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3tc2Q80VA5 Gm5264-201ENSMUST00000190584 848 ntBASIC17.71■□□□□ 0.43
Sh3tc2Q80VA5 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3tc2Q80VA5 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3tc2Q80VA5 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3tc2Q80VA5 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3tc2Q80VA5 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3tc2Q80VA5 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.71■□□□□ 0.43
Sh3tc2Q80VA5 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3tc2Q80VA5 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3tc2Q80VA5 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Sh3tc2Q80VA5 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Sh3tc2Q80VA5 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Sh3tc2Q80VA5 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3tc2Q80VA5 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3tc2Q80VA5 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3tc2Q80VA5 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3tc2Q80VA5 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3tc2Q80VA5 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3tc2Q80VA5 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.7■□□□□ 0.42
Sh3tc2Q80VA5 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3tc2Q80VA5 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3tc2Q80VA5 Gm11779-201ENSMUST00000118541 368 ntBASIC17.7■□□□□ 0.42
Sh3tc2Q80VA5 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.7■□□□□ 0.42
Sh3tc2Q80VA5 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.7■□□□□ 0.42
Sh3tc2Q80VA5 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.7■□□□□ 0.42
Sh3tc2Q80VA5 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3tc2Q80VA5 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3tc2Q80VA5 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3tc2Q80VA5 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3tc2Q80VA5 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3tc2Q80VA5 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3tc2Q80VA5 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3tc2Q80VA5 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3tc2Q80VA5 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.7■□□□□ 0.42
Sh3tc2Q80VA5 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.7■□□□□ 0.42
Sh3tc2Q80VA5 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3tc2Q80VA5 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3tc2Q80VA5 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3tc2Q80VA5 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3tc2Q80VA5 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3tc2Q80VA5 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Sh3tc2Q80VA5 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3tc2Q80VA5 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3tc2Q80VA5 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3tc2Q80VA5 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.69■□□□□ 0.42
Sh3tc2Q80VA5 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3tc2Q80VA5 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3tc2Q80VA5 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3tc2Q80VA5 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3tc2Q80VA5 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3tc2Q80VA5 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3tc2Q80VA5 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Sh3tc2Q80VA5 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3tc2Q80VA5 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3tc2Q80VA5 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3tc2Q80VA5 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3tc2Q80VA5 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3tc2Q80VA5 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3tc2Q80VA5 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3tc2Q80VA5 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3tc2Q80VA5 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.68■□□□□ 0.42
Sh3tc2Q80VA5 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Sh3tc2Q80VA5 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Sh3tc2Q80VA5 Mir5126-201ENSMUST00000175513 77 ntBASIC17.68■□□□□ 0.42
Sh3tc2Q80VA5 Gm27702-201ENSMUST00000184512 56 ntBASIC17.68■□□□□ 0.42
Sh3tc2Q80VA5 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3tc2Q80VA5 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Sh3tc2Q80VA5 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3tc2Q80VA5 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3tc2Q80VA5 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3tc2Q80VA5 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.68■□□□□ 0.42
Sh3tc2Q80VA5 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3tc2Q80VA5 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3tc2Q80VA5 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3tc2Q80VA5 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3tc2Q80VA5 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3tc2Q80VA5 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.68■□□□□ 0.42
Sh3tc2Q80VA5 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3tc2Q80VA5 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3tc2Q80VA5 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3tc2Q80VA5 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Sh3tc2Q80VA5 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.67■□□□□ 0.42
Sh3tc2Q80VA5 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3tc2Q80VA5 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3tc2Q80VA5 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Sh3tc2Q80VA5 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3tc2Q80VA5 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3tc2Q80VA5 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms