Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15□□□□□ -0.01
Pif1Q80SX8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15□□□□□ -0.01
Pif1Q80SX8 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15□□□□□ -0.01
Pif1Q80SX8 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Pif1Q80SX8 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pif1Q80SX8 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pif1Q80SX8 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pif1Q80SX8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pif1Q80SX8 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pif1Q80SX8 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Pif1Q80SX8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15□□□□□ -0.01
Pif1Q80SX8 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Pif1Q80SX8 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pif1Q80SX8 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pif1Q80SX8 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pif1Q80SX8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pif1Q80SX8 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pif1Q80SX8 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pif1Q80SX8 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pif1Q80SX8 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pif1Q80SX8 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pif1Q80SX8 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pif1Q80SX8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pif1Q80SX8 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.99□□□□□ -0.01
Pif1Q80SX8 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pif1Q80SX8 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pif1Q80SX8 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pif1Q80SX8 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.99□□□□□ -0.01
Pif1Q80SX8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pif1Q80SX8 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.99□□□□□ -0.01
Pif1Q80SX8 Mir5131-201ENSMUST00000175426 93 ntBASIC14.99□□□□□ -0.01
Pif1Q80SX8 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.99□□□□□ -0.01
Pif1Q80SX8 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.99□□□□□ -0.01
Pif1Q80SX8 Gm44357-201ENSMUST00000195897 142 ntBASIC14.99□□□□□ -0.01
Pif1Q80SX8 Gm19658-201ENSMUST00000196231 138 ntBASIC14.99□□□□□ -0.01
Pif1Q80SX8 Gm44367-201ENSMUST00000196836 138 ntBASIC14.99□□□□□ -0.01
Pif1Q80SX8 Gm44350-201ENSMUST00000197197 138 ntBASIC14.99□□□□□ -0.01
Pif1Q80SX8 Gm44390-201ENSMUST00000197533 144 ntBASIC14.99□□□□□ -0.01
Pif1Q80SX8 Gm44313-201ENSMUST00000198018 138 ntBASIC14.99□□□□□ -0.01
Pif1Q80SX8 Gm44486-201ENSMUST00000198508 138 ntBASIC14.99□□□□□ -0.01
Pif1Q80SX8 Gm44314-201ENSMUST00000199263 138 ntBASIC14.99□□□□□ -0.01
Pif1Q80SX8 Gm44394-201ENSMUST00000199558 138 ntBASIC14.99□□□□□ -0.01
Pif1Q80SX8 Gm44484-201ENSMUST00000199873 138 ntBASIC14.99□□□□□ -0.01
Pif1Q80SX8 Gm44466-201ENSMUST00000200264 138 ntBASIC14.99□□□□□ -0.01
Pif1Q80SX8 Gm44359-201ENSMUST00000200671 138 ntBASIC14.99□□□□□ -0.01
Pif1Q80SX8 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pif1Q80SX8 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pif1Q80SX8 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pif1Q80SX8 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Pif1Q80SX8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.99□□□□□ -0.01
Pif1Q80SX8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Pif1Q80SX8 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pif1Q80SX8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pif1Q80SX8 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.99□□□□□ -0.01
Pif1Q80SX8 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pif1Q80SX8 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pif1Q80SX8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Pif1Q80SX8 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pif1Q80SX8 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pif1Q80SX8 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pif1Q80SX8 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pif1Q80SX8 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Pif1Q80SX8 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.98□□□□□ -0.01
Pif1Q80SX8 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pif1Q80SX8 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pif1Q80SX8 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.98□□□□□ -0.01
Pif1Q80SX8 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.98□□□□□ -0.01
Pif1Q80SX8 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.98□□□□□ -0.01
Pif1Q80SX8 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pif1Q80SX8 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pif1Q80SX8 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pif1Q80SX8 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Pif1Q80SX8 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pif1Q80SX8 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.98□□□□□ -0.01
Pif1Q80SX8 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pif1Q80SX8 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Pif1Q80SX8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pif1Q80SX8 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Pif1Q80SX8 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pif1Q80SX8 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pif1Q80SX8 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pif1Q80SX8 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pif1Q80SX8 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pif1Q80SX8 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pif1Q80SX8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pif1Q80SX8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Pif1Q80SX8 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pif1Q80SX8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pif1Q80SX8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pif1Q80SX8 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.97□□□□□ -0.01
Pif1Q80SX8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Pif1Q80SX8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pif1Q80SX8 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.97□□□□□ -0.01
Pif1Q80SX8 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pif1Q80SX8 Gm1401-201ENSMUST00000122048 772 ntBASIC14.97□□□□□ -0.01
Pif1Q80SX8 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.97□□□□□ -0.01
Pif1Q80SX8 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.97□□□□□ -0.01
Pif1Q80SX8 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Pif1Q80SX8 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pif1Q80SX8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms