Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf139Q7TMV1 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.43■□□□□ 0.38
Rnf139Q7TMV1 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf139Q7TMV1 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Rnf139Q7TMV1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.43■□□□□ 0.38
Rnf139Q7TMV1 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf139Q7TMV1 Gm27742-201ENSMUST00000184667 60 ntBASIC17.43■□□□□ 0.38
Rnf139Q7TMV1 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.43■□□□□ 0.38
Rnf139Q7TMV1 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf139Q7TMV1 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf139Q7TMV1 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf139Q7TMV1 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf139Q7TMV1 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.43■□□□□ 0.38
Rnf139Q7TMV1 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf139Q7TMV1 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf139Q7TMV1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf139Q7TMV1 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.43■□□□□ 0.38
Rnf139Q7TMV1 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf139Q7TMV1 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf139Q7TMV1 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf139Q7TMV1 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf139Q7TMV1 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf139Q7TMV1 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf139Q7TMV1 Olfr129-201ENSMUST00000122318 993 ntBASIC17.42■□□□□ 0.38
Rnf139Q7TMV1 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf139Q7TMV1 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
Rnf139Q7TMV1 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.42■□□□□ 0.38
Rnf139Q7TMV1 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf139Q7TMV1 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Rnf139Q7TMV1 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf139Q7TMV1 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf139Q7TMV1 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf139Q7TMV1 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf139Q7TMV1 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf139Q7TMV1 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf139Q7TMV1 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf139Q7TMV1 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rnf139Q7TMV1 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.42■□□□□ 0.38
Rnf139Q7TMV1 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.42■□□□□ 0.38
Rnf139Q7TMV1 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf139Q7TMV1 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf139Q7TMV1 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf139Q7TMV1 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf139Q7TMV1 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf139Q7TMV1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf139Q7TMV1 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.41■□□□□ 0.38
Rnf139Q7TMV1 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf139Q7TMV1 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf139Q7TMV1 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf139Q7TMV1 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf139Q7TMV1 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf139Q7TMV1 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf139Q7TMV1 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.41■□□□□ 0.38
Rnf139Q7TMV1 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf139Q7TMV1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf139Q7TMV1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf139Q7TMV1 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf139Q7TMV1 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf139Q7TMV1 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf139Q7TMV1 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf139Q7TMV1 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf139Q7TMV1 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf139Q7TMV1 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf139Q7TMV1 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf139Q7TMV1 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf139Q7TMV1 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf139Q7TMV1 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf139Q7TMV1 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.4■□□□□ 0.38
Rnf139Q7TMV1 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf139Q7TMV1 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.4■□□□□ 0.38
Rnf139Q7TMV1 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf139Q7TMV1 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf139Q7TMV1 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.4■□□□□ 0.38
Rnf139Q7TMV1 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf139Q7TMV1 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf139Q7TMV1 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf139Q7TMV1 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf139Q7TMV1 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf139Q7TMV1 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf139Q7TMV1 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rnf139Q7TMV1 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Rnf139Q7TMV1 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rnf139Q7TMV1 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Rnf139Q7TMV1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf139Q7TMV1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf139Q7TMV1 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Rnf139Q7TMV1 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Rnf139Q7TMV1 Gm14859-201ENSMUST00000117752 357 ntBASIC17.39■□□□□ 0.37
Rnf139Q7TMV1 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf139Q7TMV1 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.39■□□□□ 0.37
Rnf139Q7TMV1 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Rnf139Q7TMV1 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf139Q7TMV1 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.39■□□□□ 0.37
Rnf139Q7TMV1 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf139Q7TMV1 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf139Q7TMV1 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf139Q7TMV1 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Rnf139Q7TMV1 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Rnf139Q7TMV1 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf139Q7TMV1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms