Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Casc1Q6TDU8 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Casc1Q6TDU8 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Casc1Q6TDU8 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Casc1Q6TDU8 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC19.47■□□□□ 0.71
Casc1Q6TDU8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Casc1Q6TDU8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Casc1Q6TDU8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Casc1Q6TDU8 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC19.47■□□□□ 0.71
Casc1Q6TDU8 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Casc1Q6TDU8 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Casc1Q6TDU8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Casc1Q6TDU8 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Casc1Q6TDU8 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
Casc1Q6TDU8 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Casc1Q6TDU8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.46■□□□□ 0.71
Casc1Q6TDU8 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Casc1Q6TDU8 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Casc1Q6TDU8 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Casc1Q6TDU8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Casc1Q6TDU8 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Casc1Q6TDU8 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Casc1Q6TDU8 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC19.46■□□□□ 0.71
Casc1Q6TDU8 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Casc1Q6TDU8 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Casc1Q6TDU8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.46■□□□□ 0.71
Casc1Q6TDU8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Casc1Q6TDU8 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Casc1Q6TDU8 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Casc1Q6TDU8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.46■□□□□ 0.71
Casc1Q6TDU8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Casc1Q6TDU8 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Casc1Q6TDU8 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Casc1Q6TDU8 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Casc1Q6TDU8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Casc1Q6TDU8 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Casc1Q6TDU8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Casc1Q6TDU8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Casc1Q6TDU8 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Casc1Q6TDU8 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Casc1Q6TDU8 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Casc1Q6TDU8 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Casc1Q6TDU8 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Casc1Q6TDU8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.45■□□□□ 0.7
Casc1Q6TDU8 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Casc1Q6TDU8 Gm18032-201ENSMUST00000222541 538 ntBASIC19.45■□□□□ 0.7
Casc1Q6TDU8 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Casc1Q6TDU8 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Casc1Q6TDU8 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Casc1Q6TDU8 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Casc1Q6TDU8 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Casc1Q6TDU8 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Casc1Q6TDU8 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Casc1Q6TDU8 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Casc1Q6TDU8 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Casc1Q6TDU8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Casc1Q6TDU8 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Casc1Q6TDU8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Casc1Q6TDU8 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Casc1Q6TDU8 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Casc1Q6TDU8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Casc1Q6TDU8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Casc1Q6TDU8 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.44■□□□□ 0.7
Casc1Q6TDU8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Casc1Q6TDU8 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Casc1Q6TDU8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Casc1Q6TDU8 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Casc1Q6TDU8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Casc1Q6TDU8 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.44■□□□□ 0.7
Casc1Q6TDU8 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Casc1Q6TDU8 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Casc1Q6TDU8 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Casc1Q6TDU8 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Casc1Q6TDU8 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Casc1Q6TDU8 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Casc1Q6TDU8 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Casc1Q6TDU8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Casc1Q6TDU8 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Casc1Q6TDU8 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Casc1Q6TDU8 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Casc1Q6TDU8 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Casc1Q6TDU8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Casc1Q6TDU8 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
Casc1Q6TDU8 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Casc1Q6TDU8 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.43■□□□□ 0.7
Casc1Q6TDU8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Casc1Q6TDU8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Casc1Q6TDU8 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Casc1Q6TDU8 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Casc1Q6TDU8 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Casc1Q6TDU8 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Casc1Q6TDU8 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Casc1Q6TDU8 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Casc1Q6TDU8 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Casc1Q6TDU8 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Casc1Q6TDU8 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Casc1Q6TDU8 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Casc1Q6TDU8 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Casc1Q6TDU8 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Casc1Q6TDU8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms