Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Dhx40Q6PE54 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Dhx40Q6PE54 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Dhx40Q6PE54 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.11■□□□□ 0.49
Dhx40Q6PE54 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Dhx40Q6PE54 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Dhx40Q6PE54 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Dhx40Q6PE54 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Dhx40Q6PE54 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.11■□□□□ 0.49
Dhx40Q6PE54 Gm44450-201ENSMUST00000199528 114 ntBASIC18.11■□□□□ 0.49
Dhx40Q6PE54 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Dhx40Q6PE54 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Dhx40Q6PE54 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Dhx40Q6PE54 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Dhx40Q6PE54 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Dhx40Q6PE54 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Dhx40Q6PE54 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Dhx40Q6PE54 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Dhx40Q6PE54 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Dhx40Q6PE54 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Dhx40Q6PE54 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Dhx40Q6PE54 Asic1-205ENSMUST00000228185 1818 ntBASIC18.11■□□□□ 0.49
Dhx40Q6PE54 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Dhx40Q6PE54 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Dhx40Q6PE54 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Dhx40Q6PE54 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.11■□□□□ 0.49
Dhx40Q6PE54 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Dhx40Q6PE54 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Dhx40Q6PE54 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Dhx40Q6PE54 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Dhx40Q6PE54 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.1■□□□□ 0.49
Dhx40Q6PE54 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Dhx40Q6PE54 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Dhx40Q6PE54 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Dhx40Q6PE54 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Dhx40Q6PE54 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Dhx40Q6PE54 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Dhx40Q6PE54 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Dhx40Q6PE54 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Dhx40Q6PE54 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Dhx40Q6PE54 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Dhx40Q6PE54 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Dhx40Q6PE54 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.1■□□□□ 0.49
Dhx40Q6PE54 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Dhx40Q6PE54 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Dhx40Q6PE54 Gm3375-201ENSMUST00000203929 796 ntBASIC18.1■□□□□ 0.49
Dhx40Q6PE54 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.1■□□□□ 0.49
Dhx40Q6PE54 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Dhx40Q6PE54 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Dhx40Q6PE54 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Dhx40Q6PE54 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Dhx40Q6PE54 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Dhx40Q6PE54 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Dhx40Q6PE54 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Dhx40Q6PE54 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Dhx40Q6PE54 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC18.09■□□□□ 0.49
Dhx40Q6PE54 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.09■□□□□ 0.49
Dhx40Q6PE54 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Dhx40Q6PE54 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Dhx40Q6PE54 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Dhx40Q6PE54 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Dhx40Q6PE54 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.09■□□□□ 0.49
Dhx40Q6PE54 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Dhx40Q6PE54 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Dhx40Q6PE54 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Dhx40Q6PE54 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Dhx40Q6PE54 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Dhx40Q6PE54 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Dhx40Q6PE54 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Dhx40Q6PE54 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Dhx40Q6PE54 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Dhx40Q6PE54 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Dhx40Q6PE54 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.09■□□□□ 0.49
Dhx40Q6PE54 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Dhx40Q6PE54 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Dhx40Q6PE54 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Dhx40Q6PE54 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Dhx40Q6PE54 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Dhx40Q6PE54 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Dhx40Q6PE54 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Dhx40Q6PE54 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Dhx40Q6PE54 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Dhx40Q6PE54 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Dhx40Q6PE54 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.08■□□□□ 0.48
Dhx40Q6PE54 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Dhx40Q6PE54 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Dhx40Q6PE54 Gm18115-201ENSMUST00000221209 621 ntBASIC18.08■□□□□ 0.48
Dhx40Q6PE54 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Dhx40Q6PE54 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Dhx40Q6PE54 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Dhx40Q6PE54 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Dhx40Q6PE54 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Dhx40Q6PE54 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Dhx40Q6PE54 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Dhx40Q6PE54 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Dhx40Q6PE54 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
Dhx40Q6PE54 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Dhx40Q6PE54 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Dhx40Q6PE54 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
Dhx40Q6PE54 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms