Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Chd4Q6PDQ2 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chd4Q6PDQ2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Chd4Q6PDQ2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
Chd4Q6PDQ2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC21.16■□□□□ 0.98
Chd4Q6PDQ2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chd4Q6PDQ2 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC21.16■□□□□ 0.98
Chd4Q6PDQ2 Gm27300-201ENSMUST00000184085 97 ntBASIC21.16■□□□□ 0.98
Chd4Q6PDQ2 Gm27335-201ENSMUST00000184758 97 ntBASIC21.16■□□□□ 0.98
Chd4Q6PDQ2 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Chd4Q6PDQ2 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chd4Q6PDQ2 Gm5648-201ENSMUST00000122244 1587 ntBASIC21.16■□□□□ 0.98
Chd4Q6PDQ2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Chd4Q6PDQ2 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chd4Q6PDQ2 H2af-ps-201ENSMUST00000119066 295 ntBASIC21.16■□□□□ 0.98
Chd4Q6PDQ2 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC21.16■□□□□ 0.98
Chd4Q6PDQ2 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC21.16■□□□□ 0.98
Chd4Q6PDQ2 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chd4Q6PDQ2 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Chd4Q6PDQ2 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC21.16■□□□□ 0.98
Chd4Q6PDQ2 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chd4Q6PDQ2 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd4Q6PDQ2 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd4Q6PDQ2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd4Q6PDQ2 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd4Q6PDQ2 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC21.15■□□□□ 0.98
Chd4Q6PDQ2 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd4Q6PDQ2 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd4Q6PDQ2 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Chd4Q6PDQ2 Gm18622-201ENSMUST00000219361 595 ntBASIC21.15■□□□□ 0.98
Chd4Q6PDQ2 Gm15635-204ENSMUST00000208024 2539 ntBASIC21.15■□□□□ 0.98
Chd4Q6PDQ2 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd4Q6PDQ2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd4Q6PDQ2 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Chd4Q6PDQ2 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Chd4Q6PDQ2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Chd4Q6PDQ2 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Chd4Q6PDQ2 Gm9682-201ENSMUST00000197505 556 ntBASIC21.14■□□□□ 0.98
Chd4Q6PDQ2 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Chd4Q6PDQ2 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Chd4Q6PDQ2 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chd4Q6PDQ2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chd4Q6PDQ2 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Chd4Q6PDQ2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chd4Q6PDQ2 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Chd4Q6PDQ2 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC21.14■□□□□ 0.97
Chd4Q6PDQ2 Gm2213-201ENSMUST00000197485 688 ntBASIC21.14■□□□□ 0.97
Chd4Q6PDQ2 Gm45683-201ENSMUST00000210825 1247 ntBASIC21.14■□□□□ 0.97
Chd4Q6PDQ2 CT943659.1-201ENSMUST00000215459 326 ntBASIC21.14■□□□□ 0.97
Chd4Q6PDQ2 AC154572.2-201ENSMUST00000225105 997 ntBASIC21.14■□□□□ 0.97
Chd4Q6PDQ2 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chd4Q6PDQ2 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chd4Q6PDQ2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Chd4Q6PDQ2 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC21.13■□□□□ 0.97
Chd4Q6PDQ2 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chd4Q6PDQ2 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC21.13■□□□□ 0.97
Chd4Q6PDQ2 AC225888.1-201ENSMUST00000227184 728 ntBASIC21.13■□□□□ 0.97
Chd4Q6PDQ2 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chd4Q6PDQ2 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chd4Q6PDQ2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Chd4Q6PDQ2 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chd4Q6PDQ2 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Chd4Q6PDQ2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chd4Q6PDQ2 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chd4Q6PDQ2 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chd4Q6PDQ2 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Chd4Q6PDQ2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Chd4Q6PDQ2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chd4Q6PDQ2 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chd4Q6PDQ2 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC21.12■□□□□ 0.97
Chd4Q6PDQ2 Mir8117-201ENSMUST00000184773 107 ntBASIC21.12■□□□□ 0.97
Chd4Q6PDQ2 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC21.12■□□□□ 0.97
Chd4Q6PDQ2 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chd4Q6PDQ2 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chd4Q6PDQ2 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd4Q6PDQ2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd4Q6PDQ2 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC21.11■□□□□ 0.97
Chd4Q6PDQ2 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC21.11■□□□□ 0.97
Chd4Q6PDQ2 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd4Q6PDQ2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd4Q6PDQ2 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd4Q6PDQ2 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
Chd4Q6PDQ2 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Chd4Q6PDQ2 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd4Q6PDQ2 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd4Q6PDQ2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd4Q6PDQ2 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
Chd4Q6PDQ2 Gm37153-201ENSMUST00000193637 231 ntBASIC21.11■□□□□ 0.97
Chd4Q6PDQ2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd4Q6PDQ2 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
Chd4Q6PDQ2 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
Chd4Q6PDQ2 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd4Q6PDQ2 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd4Q6PDQ2 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Chd4Q6PDQ2 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd4Q6PDQ2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd4Q6PDQ2 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd4Q6PDQ2 Gm11185-201ENSMUST00000117732 1007 ntBASIC21.1■□□□□ 0.97
Chd4Q6PDQ2 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC21.1■□□□□ 0.97
Chd4Q6PDQ2 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms