Protein–RNA interactions for Protein: Q6PDJ1

Cachd1, VWFA and cache domain-containing protein 1, mousemouse

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cachd1Q6PDJ1 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cachd1Q6PDJ1 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cachd1Q6PDJ1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cachd1Q6PDJ1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cachd1Q6PDJ1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cachd1Q6PDJ1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cachd1Q6PDJ1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cachd1Q6PDJ1 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Cachd1Q6PDJ1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cachd1Q6PDJ1 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cachd1Q6PDJ1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cachd1Q6PDJ1 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Cachd1Q6PDJ1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cachd1Q6PDJ1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cachd1Q6PDJ1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cachd1Q6PDJ1 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
Cachd1Q6PDJ1 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cachd1Q6PDJ1 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Cachd1Q6PDJ1 Gm25745-201ENSMUST00000174945 133 ntBASIC16.41■□□□□ 0.22
Cachd1Q6PDJ1 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cachd1Q6PDJ1 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cachd1Q6PDJ1 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cachd1Q6PDJ1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cachd1Q6PDJ1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cachd1Q6PDJ1 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cachd1Q6PDJ1 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cachd1Q6PDJ1 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cachd1Q6PDJ1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Cachd1Q6PDJ1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cachd1Q6PDJ1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cachd1Q6PDJ1 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cachd1Q6PDJ1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cachd1Q6PDJ1 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cachd1Q6PDJ1 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cachd1Q6PDJ1 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cachd1Q6PDJ1 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cachd1Q6PDJ1 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.4■□□□□ 0.22
Cachd1Q6PDJ1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cachd1Q6PDJ1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cachd1Q6PDJ1 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cachd1Q6PDJ1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cachd1Q6PDJ1 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cachd1Q6PDJ1 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cachd1Q6PDJ1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cachd1Q6PDJ1 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Cachd1Q6PDJ1 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cachd1Q6PDJ1 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cachd1Q6PDJ1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cachd1Q6PDJ1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cachd1Q6PDJ1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.39■□□□□ 0.21
Cachd1Q6PDJ1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cachd1Q6PDJ1 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cachd1Q6PDJ1 Gm6912-201ENSMUST00000117218 544 ntBASIC16.39■□□□□ 0.21
Cachd1Q6PDJ1 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cachd1Q6PDJ1 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC16.39■□□□□ 0.21
Cachd1Q6PDJ1 Gtpbp10-211ENSMUST00000198799 648 ntBASIC16.39■□□□□ 0.21
Cachd1Q6PDJ1 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.39■□□□□ 0.21
Cachd1Q6PDJ1 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.39■□□□□ 0.21
Cachd1Q6PDJ1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cachd1Q6PDJ1 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Cachd1Q6PDJ1 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cachd1Q6PDJ1 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cachd1Q6PDJ1 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cachd1Q6PDJ1 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cachd1Q6PDJ1 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cachd1Q6PDJ1 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cachd1Q6PDJ1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cachd1Q6PDJ1 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cachd1Q6PDJ1 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Cachd1Q6PDJ1 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cachd1Q6PDJ1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cachd1Q6PDJ1 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cachd1Q6PDJ1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cachd1Q6PDJ1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cachd1Q6PDJ1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cachd1Q6PDJ1 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cachd1Q6PDJ1 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cachd1Q6PDJ1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cachd1Q6PDJ1 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cachd1Q6PDJ1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cachd1Q6PDJ1 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Cachd1Q6PDJ1 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.38■□□□□ 0.21
Cachd1Q6PDJ1 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cachd1Q6PDJ1 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cachd1Q6PDJ1 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.38■□□□□ 0.21
Cachd1Q6PDJ1 Gm25948-201ENSMUST00000175334 112 ntBASIC16.38■□□□□ 0.21
Cachd1Q6PDJ1 Gm29791-202ENSMUST00000207888 369 ntBASIC16.38■□□□□ 0.21
Cachd1Q6PDJ1 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cachd1Q6PDJ1 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cachd1Q6PDJ1 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Cachd1Q6PDJ1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cachd1Q6PDJ1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cachd1Q6PDJ1 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Cachd1Q6PDJ1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cachd1Q6PDJ1 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cachd1Q6PDJ1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cachd1Q6PDJ1 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cachd1Q6PDJ1 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Cachd1Q6PDJ1 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Cachd1Q6PDJ1 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms