Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcc2Q6PDG5 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.02■□□□□ 0.64
Smarcc2Q6PDG5 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcc2Q6PDG5 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcc2Q6PDG5 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Smarcc2Q6PDG5 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smarcc2Q6PDG5 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smarcc2Q6PDG5 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smarcc2Q6PDG5 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Smarcc2Q6PDG5 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smarcc2Q6PDG5 Gm43072-201ENSMUST00000200283 1671 ntBASIC19.01■□□□□ 0.63
Smarcc2Q6PDG5 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcc2Q6PDG5 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcc2Q6PDG5 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcc2Q6PDG5 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcc2Q6PDG5 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcc2Q6PDG5 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcc2Q6PDG5 Gm36967-201ENSMUST00000193814 266 ntBASIC19.01■□□□□ 0.63
Smarcc2Q6PDG5 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcc2Q6PDG5 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcc2Q6PDG5 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcc2Q6PDG5 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcc2Q6PDG5 Dancr-204ENSMUST00000132389 2347 ntBASIC19.01■□□□□ 0.63
Smarcc2Q6PDG5 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcc2Q6PDG5 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcc2Q6PDG5 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcc2Q6PDG5 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcc2Q6PDG5 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcc2Q6PDG5 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Smarcc2Q6PDG5 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Smarcc2Q6PDG5 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcc2Q6PDG5 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcc2Q6PDG5 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19■□□□□ 0.63
Smarcc2Q6PDG5 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Smarcc2Q6PDG5 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19■□□□□ 0.63
Smarcc2Q6PDG5 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smarcc2Q6PDG5 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19■□□□□ 0.63
Smarcc2Q6PDG5 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smarcc2Q6PDG5 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
Smarcc2Q6PDG5 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smarcc2Q6PDG5 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcc2Q6PDG5 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smarcc2Q6PDG5 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcc2Q6PDG5 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcc2Q6PDG5 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smarcc2Q6PDG5 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcc2Q6PDG5 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smarcc2Q6PDG5 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smarcc2Q6PDG5 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcc2Q6PDG5 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smarcc2Q6PDG5 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcc2Q6PDG5 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcc2Q6PDG5 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcc2Q6PDG5 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Smarcc2Q6PDG5 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcc2Q6PDG5 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcc2Q6PDG5 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcc2Q6PDG5 Gm11950-201ENSMUST00000121615 838 ntBASIC18.99■□□□□ 0.63
Smarcc2Q6PDG5 Gm7284-201ENSMUST00000131667 944 ntBASIC18.99■□□□□ 0.63
Smarcc2Q6PDG5 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Smarcc2Q6PDG5 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcc2Q6PDG5 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.99■□□□□ 0.63
Smarcc2Q6PDG5 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Smarcc2Q6PDG5 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcc2Q6PDG5 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.99■□□□□ 0.63
Smarcc2Q6PDG5 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcc2Q6PDG5 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcc2Q6PDG5 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcc2Q6PDG5 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcc2Q6PDG5 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcc2Q6PDG5 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcc2Q6PDG5 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcc2Q6PDG5 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcc2Q6PDG5 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcc2Q6PDG5 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.98■□□□□ 0.63
Smarcc2Q6PDG5 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcc2Q6PDG5 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.98■□□□□ 0.63
Smarcc2Q6PDG5 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcc2Q6PDG5 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcc2Q6PDG5 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcc2Q6PDG5 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcc2Q6PDG5 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.98■□□□□ 0.63
Smarcc2Q6PDG5 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.98■□□□□ 0.63
Smarcc2Q6PDG5 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Smarcc2Q6PDG5 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcc2Q6PDG5 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcc2Q6PDG5 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcc2Q6PDG5 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcc2Q6PDG5 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.98■□□□□ 0.63
Smarcc2Q6PDG5 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcc2Q6PDG5 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcc2Q6PDG5 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Smarcc2Q6PDG5 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcc2Q6PDG5 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcc2Q6PDG5 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcc2Q6PDG5 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcc2Q6PDG5 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcc2Q6PDG5 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcc2Q6PDG5 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcc2Q6PDG5 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms