Protein–RNA interactions for Protein: Q6P9P0

Slf2, SMC5-SMC6 complex localization factor protein 2, mousemouse

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf2Q6P9P0 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slf2Q6P9P0 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC20.09■□□□□ 0.81
Slf2Q6P9P0 Gm6858-201ENSMUST00000208582 1468 ntBASIC20.09■□□□□ 0.81
Slf2Q6P9P0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
Slf2Q6P9P0 AC132265.1-201ENSMUST00000219233 1665 ntBASIC20.09■□□□□ 0.81
Slf2Q6P9P0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Slf2Q6P9P0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Slf2Q6P9P0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Slf2Q6P9P0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Slf2Q6P9P0 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Slf2Q6P9P0 AC122901.1-201ENSMUST00000214203 1790 ntBASIC20.08■□□□□ 0.81
Slf2Q6P9P0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Slf2Q6P9P0 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slf2Q6P9P0 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Slf2Q6P9P0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Slf2Q6P9P0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slf2Q6P9P0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Slf2Q6P9P0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slf2Q6P9P0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC20.08■□□□□ 0.81
Slf2Q6P9P0 Gm2756-201ENSMUST00000195851 400 ntBASIC20.08■□□□□ 0.81
Slf2Q6P9P0 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC20.08■□□□□ 0.81
Slf2Q6P9P0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Slf2Q6P9P0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slf2Q6P9P0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slf2Q6P9P0 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.08■□□□□ 0.8
Slf2Q6P9P0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Slf2Q6P9P0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Slf2Q6P9P0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slf2Q6P9P0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.07■□□□□ 0.8
Slf2Q6P9P0 Gm4995-201ENSMUST00000117247 432 ntBASIC20.07■□□□□ 0.8
Slf2Q6P9P0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slf2Q6P9P0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slf2Q6P9P0 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC20.07■□□□□ 0.8
Slf2Q6P9P0 AC090659.1-201ENSMUST00000224334 768 ntBASIC20.07■□□□□ 0.8
Slf2Q6P9P0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Slf2Q6P9P0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slf2Q6P9P0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slf2Q6P9P0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC20.07■□□□□ 0.8
Slf2Q6P9P0 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Slf2Q6P9P0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slf2Q6P9P0 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Slf2Q6P9P0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slf2Q6P9P0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slf2Q6P9P0 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Slf2Q6P9P0 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slf2Q6P9P0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slf2Q6P9P0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slf2Q6P9P0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Slf2Q6P9P0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slf2Q6P9P0 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slf2Q6P9P0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Slf2Q6P9P0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC20.06■□□□□ 0.8
Slf2Q6P9P0 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC20.06■□□□□ 0.8
Slf2Q6P9P0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC20.06■□□□□ 0.8
Slf2Q6P9P0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slf2Q6P9P0 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slf2Q6P9P0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Slf2Q6P9P0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slf2Q6P9P0 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slf2Q6P9P0 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Slf2Q6P9P0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Slf2Q6P9P0 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slf2Q6P9P0 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slf2Q6P9P0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slf2Q6P9P0 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Slf2Q6P9P0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slf2Q6P9P0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slf2Q6P9P0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slf2Q6P9P0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slf2Q6P9P0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slf2Q6P9P0 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Slf2Q6P9P0 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slf2Q6P9P0 Mir6404-201ENSMUST00000183699 94 ntBASIC20.05■□□□□ 0.8
Slf2Q6P9P0 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slf2Q6P9P0 AC084391.1-201ENSMUST00000200651 141 ntBASIC20.05■□□□□ 0.8
Slf2Q6P9P0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slf2Q6P9P0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slf2Q6P9P0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slf2Q6P9P0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slf2Q6P9P0 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC20.05■□□□□ 0.8
Slf2Q6P9P0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Slf2Q6P9P0 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slf2Q6P9P0 Gm23935-201ENSMUST00000102303 57 ntBASIC20.04■□□□□ 0.8
Slf2Q6P9P0 Gm24270-201ENSMUST00000102326 57 ntBASIC20.04■□□□□ 0.8
Slf2Q6P9P0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC20.04■□□□□ 0.8
Slf2Q6P9P0 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC20.04■□□□□ 0.8
Slf2Q6P9P0 Gm24245-201ENSMUST00000157318 57 ntBASIC20.04■□□□□ 0.8
Slf2Q6P9P0 AC159106.1-201ENSMUST00000224421 690 ntBASIC20.04■□□□□ 0.8
Slf2Q6P9P0 AC225888.1-201ENSMUST00000227184 728 ntBASIC20.04■□□□□ 0.8
Slf2Q6P9P0 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slf2Q6P9P0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slf2Q6P9P0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Slf2Q6P9P0 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC20.04■□□□□ 0.8
Slf2Q6P9P0 Shroom3-211ENSMUST00000225438 5742 ntBASIC20.04■□□□□ 0.8
Slf2Q6P9P0 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slf2Q6P9P0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slf2Q6P9P0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slf2Q6P9P0 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slf2Q6P9P0 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Slf2Q6P9P0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms