Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgb4Q6P8W9 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgb4Q6P8W9 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgb4Q6P8W9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgb4Q6P8W9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Hmgb4Q6P8W9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgb4Q6P8W9 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgb4Q6P8W9 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgb4Q6P8W9 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgb4Q6P8W9 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.04■□□□□ 0.32
Hmgb4Q6P8W9 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.04■□□□□ 0.32
Hmgb4Q6P8W9 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.04■□□□□ 0.32
Hmgb4Q6P8W9 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Hmgb4Q6P8W9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Hmgb4Q6P8W9 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgb4Q6P8W9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgb4Q6P8W9 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgb4Q6P8W9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgb4Q6P8W9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgb4Q6P8W9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Hmgb4Q6P8W9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgb4Q6P8W9 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgb4Q6P8W9 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgb4Q6P8W9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgb4Q6P8W9 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Hmgb4Q6P8W9 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgb4Q6P8W9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Hmgb4Q6P8W9 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.03■□□□□ 0.32
Hmgb4Q6P8W9 Gm11452-201ENSMUST00000122376 690 ntBASIC17.03■□□□□ 0.32
Hmgb4Q6P8W9 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgb4Q6P8W9 Mir8098-201ENSMUST00000184011 137 ntBASIC17.03■□□□□ 0.32
Hmgb4Q6P8W9 Gm29707-201ENSMUST00000196325 491 ntBASIC17.03■□□□□ 0.32
Hmgb4Q6P8W9 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgb4Q6P8W9 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgb4Q6P8W9 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgb4Q6P8W9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgb4Q6P8W9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgb4Q6P8W9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.03■□□□□ 0.32
Hmgb4Q6P8W9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgb4Q6P8W9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgb4Q6P8W9 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgb4Q6P8W9 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Hmgb4Q6P8W9 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgb4Q6P8W9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgb4Q6P8W9 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgb4Q6P8W9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgb4Q6P8W9 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgb4Q6P8W9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgb4Q6P8W9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgb4Q6P8W9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgb4Q6P8W9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgb4Q6P8W9 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgb4Q6P8W9 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgb4Q6P8W9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Hmgb4Q6P8W9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgb4Q6P8W9 Gm13216-201ENSMUST00000117145 591 ntBASIC17.02■□□□□ 0.32
Hmgb4Q6P8W9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Hmgb4Q6P8W9 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgb4Q6P8W9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgb4Q6P8W9 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgb4Q6P8W9 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgb4Q6P8W9 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Hmgb4Q6P8W9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Hmgb4Q6P8W9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Hmgb4Q6P8W9 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hmgb4Q6P8W9 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hmgb4Q6P8W9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgb4Q6P8W9 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgb4Q6P8W9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgb4Q6P8W9 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgb4Q6P8W9 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.01■□□□□ 0.31
Hmgb4Q6P8W9 Gm13884-201ENSMUST00000118103 829 ntBASIC17.01■□□□□ 0.31
Hmgb4Q6P8W9 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.01■□□□□ 0.31
Hmgb4Q6P8W9 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.01■□□□□ 0.31
Hmgb4Q6P8W9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgb4Q6P8W9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.01■□□□□ 0.31
Hmgb4Q6P8W9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.01■□□□□ 0.31
Hmgb4Q6P8W9 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgb4Q6P8W9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgb4Q6P8W9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgb4Q6P8W9 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgb4Q6P8W9 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.01■□□□□ 0.31
Hmgb4Q6P8W9 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgb4Q6P8W9 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgb4Q6P8W9 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgb4Q6P8W9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Hmgb4Q6P8W9 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgb4Q6P8W9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17■□□□□ 0.31
Hmgb4Q6P8W9 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17■□□□□ 0.31
Hmgb4Q6P8W9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgb4Q6P8W9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgb4Q6P8W9 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgb4Q6P8W9 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgb4Q6P8W9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Hmgb4Q6P8W9 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Hmgb4Q6P8W9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Hmgb4Q6P8W9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgb4Q6P8W9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17■□□□□ 0.31
Hmgb4Q6P8W9 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hmgb4Q6P8W9 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms